Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00569 ATGGGGCTCTTACAGGAGAAGCTGTCCTCGTTCTACAGGAGCCGATGGCTGGTGTTCGTTGCGGCAATGTGGTTGCAGTCGTGGGCGGGTATCGGCTACCTCTTCGGGAGTATATCGCCGGTCATCAAGAGCTCTCTCGGATACAATCAGAAGCAGCTCGCCATGTTGGGTGTGGCCAAGGACCTAGGCGACGCCGTCGGCTTCATGACGGGGTTGCTCTGTGAGTTGTTACCCATCTGGGGTGCTCTCCTTGTTGGTGCTGCTTTGAACCTCGTCGGCTATGGCTGGGTCTGGTTGGTTGTAACAGCTCAAGTTCCAGTTTTGCCTTTGTGGGCAATGTGTGTTCTTATCTTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTCTGGTATCCTGTGTACAAAATTTCCCCAAAAGTCGGGGTCCTGTTGTGGGAATTCTGAAGGGCTTTGCTGGGTTGAGTGGTGCAATCTTGACACAGATATATGCGTTGTTCCATGCCCCTAATCAAGCATCATTAATATTTATGGTTGCTGTTGGTCCAGCATTGGTAGGAATAGGTCTTATGTTCCTTGTTAGGCCTGTTGGGGGACACAAACAAGTCCGGCCATCAGATGGAAAATGCTTCACGTTTGTGTATGGTGTGTGCCTCCTATTGGCTGCTTATTTGTTGGGAGTCATGGTTGTCCAAGATTTAGTTGAAGTGAGTGAAACTGTAATCTCTATATTCACAATTATTCTCTTGTTGATTCTTGTTATCCCAATTGTTATTCCTATTATATTGAGTTTTGGCCCTGAGCAAAGAAATCCAGAAGAAGAGTCCCTTCTTCCAGAACCACAGAATAAAGATCCTGGGAAATCTCAGTCGGATTCTGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATCAGAGAGACAGAAACGTATAGCGCACTTACAACAAAGATTGCTCCAAGCAGCTGCAGTGGGAGCAGTGAGGGTTAAGAGGAGGAGGGGACCACACAGAGGGGAAGATTTCACCCTGACGCAAGCATTGATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCTGGATCCGGGTTGACTGTAATTGACAATCTGGGTCAGATGAGCCAATCTCTAGGATATGACAATGCACATATATTTGTCTCCATGGTCAGTATTTGGAACTTCCTTGGTCGTGTTGGAGGAGGTTACATATCTGAGCTTGTTGTGAGAGATCATGCGTATCCCAGACCAATTGCATTGGCTGTATTTCAACTCATTATGACTGTTGGGCATCTTTTCATTGGTATGGGATGGCCAGGGGCAATGTATGTCGGCACTTTACTGGTTGGACTTGGTTACGGGGCTCATTGGGCAATTGTTCCAGCCACTGCCTCTGAGTTGTTTGGTCTGAGAAACTTTGGTGCACTGTACAATTTCATTACTCTGGCAAACCCTGCAGGAACACTGGTTTTCTCTAGTCTCATTGCCAGCACCATCTACGATTCTGAAGCAGCGAAACAACATCCCCAAAGTATGGGAGGATCAATGCTGTTGCATTTGCAACATGCTACTGAGTCTCTAAAGTGTGAAGGTAGCATATGTTTTTTCCTAACTTCCATGATCATGGCAGCATTATGCGTTCTTGCAGCAGGCCTATGCATGGTTCTAGTGTCGAGAACAAGGATTGTTTATGCCAACCTATATGGAAAAACCTCTTCTAGTAGGCTTCGATTATGA 1776 0.4617 MGLLQEKLSSFYRSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDAVGFMTGLLCELLPIWGALLVGAALNLVGYGWVWLVVTAQVPVLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALFHAPNQASLIFMVAVGPALVGIGLMFLVRPVGGHKQVRPSDGKCFTFVYGVCLLLAAYLLGVMVVQDLVEVSETVISIFTIILLLILVIPIVIPIILSFGPEQRNPEEESLLPEPQNKDPGKSQSDSDEVILSELEDEKPKEVDMLPASERQKRIAHLQQRLLQAAAVGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMVSIWNFLGRVGGGYISELVVRDHAYPRPIALAVFQLIMTVGHLFIGMGWPGAMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLVFSSLIASTIYDSEAAKQHPQSMGGSMLLHLQHATESLKCEGSICFFLTSMIMAALCVLAAGLCMVLVSRTRIVYANLYGKTSSSRLRL* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00569 591 CDD MFS_Mch1p_like 14 563 - -
Lapu1g00569 591 Gene3D MFS general substrate transporter like domains 360 583 IPR036259 -
Lapu1g00569 591 MobiDBLite consensus disorder prediction 273 295 - -
Lapu1g00569 591 Pfam Nodulin-like 15 262 IPR010658 -
Lapu1g00569 591 SUPERFAMILY MFS general substrate transporter 10 197 IPR036259 -
Lapu1g00569 591 MobiDBLite consensus disorder prediction 274 292 - -
Lapu1g00569 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 578 - -
Lapu1g00569 591 SUPERFAMILY MFS general substrate transporter 212 574 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00569 Lapu-Chr1 17945845 17950120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00569 5 586 Nodulin-like Gene Family AT5G14120 70.256 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00569 - - gmx:100796700 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00569 1 17945845 17950120 Lapu1g00569 1 17945845 17950120 ECH