Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00559 ATGGAGAATTATACCATGCTGTTCCCTTGTCCCAATTCTTCCAGCTACCCCGTTTCAACTAGTGGTGTGGGAGTCTCTCAGCATGGTTTTGGTGGTCAAAGCTCCAATGCATTCCTAGGTCTAAGGCCTAGTAATGAGAGTAGTAGTAGTGATCATGAAAAGAGAGGAGAGGGTGGTAGAGATGGTGCCATGTTAATGTCTCAGATCAGTGGTGGAATTAATGTGAGCGATGAGTTAGGTGGTTTGGGAAATGGTAATAATAATAATAGCAAAAAGAAAGGAGAGAAAAAGGTTAGAAAGCCTAGATATGCTTTCCAAACGAGGAGCCAGGTTGATATTCTTGATGATGGTTATCGGTGGAGGAAGTATGGCCAAAAAGCTGTCAAAAACAACAAGTTTCCCAGGAGTTACTACCGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTCCAACGCCTAACCAAAGACGAAGGGGTAGTGGTGACTACTTATGAGGGAGTGCACACTCACCCAATTGAGAAGACAACAGATAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 582 0.433 MENYTMLFPCPNSSSYPVSTSGVGVSQHGFGGQSSNAFLGLRPSNESSSSDHEKRGEGGRDGAMLMSQISGGINVSDELGGLGNGNNNNSKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00559 193 Gene3D WRKY domain 99 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g00559 193 MobiDBLite consensus disorder prediction 34 63 - -
Lapu1g00559 193 Pfam WRKY DNA -binding domain 115 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g00559 193 SMART WRKY_cls 114 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g00559 193 FunFam WRKY transcription factor 57 100 174 - -
Lapu1g00559 193 MobiDBLite consensus disorder prediction 76 101 - -
Lapu1g00559 193 ProSiteProfiles WRKY domain profile. 109 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu1g00559 193 SUPERFAMILY WRKY DNA-binding domain 106 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu1g00559 193 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 176 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00559 Lapu-Chr1 17745552 17747437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00559 102 193 WRKY Transcription Factor Family AT5G13080 88.043 8.73e-59 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu1g00559 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00559 - - pvu:PHAVU_001G088200g 359.762