Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00548 ATGGAAATGGCTAATGAAAATGGTTTCCAGCTTAGTGTGAAGCTAGGTGAACCAACTCTCGTTCCTCCTGCTGAAGAAACAAAGAAGGGTTTGTATTTCCTATCTAACCTTGACCAGAACATTGCAGTGATTGTGAGAACTGTTTATTGTTTCAAAACTGCTGAGAGGGGGAATGAGAAGGCTGGGGAAGTGATAAAGAATGCACTGAAGAAGGTTCTTGTCCACTATTACCCTCTTGCTGGTAGGCTTACTATAAGCTCAGAGGGTAAACTCATAGTGGATTGCACAGGGGAAGGTGCCTTGTTTGTGGAGGCTGAAGCAAACTGTTCAATGGAAGAGATTGGTGACATCACAAAGCCAGACCCTGGGACTCTTGGTAAGCTGGTTTATGATATTCCTGGAGCAAAGCACATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACCAAGTTCAAATGTGGAGGCTTTGCTCTTGGGTTGTGCATGAATCACTGCATGTTTGATGGCATTGGTGCAATGGAGTTTGTGAACTCTTGGGGACAAGTAGCCAGAGACTTGCCACTCTCAATCCCTCCAGTGCTGGACAGAAGCATACTAAAGGCAAGAAACCCACCAAAGATAGAGAACCTGCATCAAGAATTTGCTGACATAGAAGACAAATCCAATACTAATAGTTTATACGAAGATGAAATGGTTTACAGGTCCTTCTGTTTTGATCCTGAGAAACTAAAGCAGCTGAAGATGAAAGCAATGCAAGATGGGGCTCTTGACACATGCACCACATTTGAAGTCCTCTCAGCATTTGTGTGGATAGCAAGAACCAAGGCACTGAAAATGTTGCCTGAACAGCAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCCAAGTTCAACCCCCCTCTTTCAAAAGGGTACTTTGGAAATGGAATTGTGCTAACAAATTCTGTTTGCCAAGCTGGGGAACTAACACAAAAGCCTTTGTCATTTGCTGTGGGACTTATTCAAGATGCAATCAAGATGGTGACAGACAGCTACATGAGATCAGCAATTGATTACTTTGAGGTGACAAGAACAAGGCCTTCCCTTGCTTGCACTCTTCTTATCACAACTTGGTCTAGGCTTTCCTTTCACACCACCGATTTTGGATGGGGAGATCCAGTGCTGTCAGGACCTGTGTCACTGCCAGAGAAGGAAGTGATTTTGTTCCTTTCTCATGGCCAAGAGAGAAGAAATATAAATGTGCTTCTGGGTTTGCCTGCTACTGTCATGAAGATTTTCCAAGATTTGATGCAGATCTAA 1299 0.4373 MEMANENGFQLSVKLGEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTAERGNEKAGEVIKNALKKVLVHYYPLAGRLTISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGQVARDLPLSIPPVLDRSILKARNPPKIENLHQEFADIEDKSNTNSLYEDEMVYRSFCFDPEKLKQLKMKAMQDGALDTCTTFEVLSAFVWIARTKALKMLPEQQTKLLFAVDGRAKFNPPLSKGYFGNGIVLTNSVCQAGELTQKPLSFAVGLIQDAIKMVTDSYMRSAIDYFEVTRTRPSLACTLLITTWSRLSFHTTDFGWGDPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPATVMKIFQDLMQI* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00548 432 Gene3D - 8 213 IPR023213 -
Lapu1g00548 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 428 - -
Lapu1g00548 432 FunFam Tryptamine hydroxycinnamoyl transferase 218 431 - -
Lapu1g00548 432 Pfam Transferase family 13 429 - -
Lapu1g00548 432 Gene3D - 214 431 IPR023213 -
Lapu1g00548 432 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00548 Lapu-Chr1 17443757 17446010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00548 11 430 Monolignol Biosynthesis Gene Families AT5G48930 33.565 1.24e-80 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00548 K15400 - gmx:100804504 823.542