Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00542 ATGGAGAATAATGACCTTGTCACTAATAACGCCGGTGACGCGCAGTCTCCTCCGGATGCTAAACCAGACGCTGCCGCCGCCCAAGCGGAACCGTCGTCCCCGACTCCGCATGGTCATGCAAAGGAGGAAGAAACCGCAGCTTCTACTCCGCCAAGCCTGGAGAAAGTTGCTCAAGAAATTGACAAATTCTTGAGGGGTACAAAAAACGATGGAAATGCGCAGAACTTTGAGATTCCTGACTTCGCTGAGAGGTACTTGGATCTGGTGGAAGAGAAGATAATGAAATACGACGCAGGTGAGGGTAAACCGAAATGGGGAGAGGGGTCGGAGGAAGATTCGTGGTTGGTGGACAGCGCGAATCGGTTTTCAAAACTGATGACGTTGGTCACTGATAATCATCGCAATCATGAACCGGACAAGATCAACGGTGCACAAGTCTCGATGACGAACCGCATTAGCTCAATCCACCAGCGTTTGATGACGTATTTGGAGGAAGACTTCCGGTTTCTGATCGAAGAATCCAGAATCCCAACTGAATTGGATCCCGGAGGGAATAATCAGAACAGCGTCGATACCAAAGGGAAACATCACATGGCGGCATCCGAACAACAACAAGAGGTGGTGCAAGAGCAAGAAGGTGGTGAACAAGACACAAATTTCCCGGGGTACTCGGAGGAGACGATTGCCAGTCTAAATAAGATCGCCGGCGAGATGTTATTCGGCGGCTACGAATCGGAGTGCTGCCAGGTATACATCATTTCGCGGAGGAACGCCTTCGATGAGATTCTCCAGAAGCTAGGGTTGGAGAGGATCAGCATCGACGAGATGGTGACGAAGGTGCAGTGGGAGACTCTGGCCAGGGACATGATCCCCGCCTGGATCAACACGCTAAAGCAGTGCGCCACAGTGTACTTCCCTGGCGAGCGGAAGTTGACCGAGGCCGTGTTCGCGGAAAACCACACCGTGGCTGCTGGACTCTTTAGCAGCCTCTCCCGCGGCGTAGTGATTCAGCTTCTGAACTTCGCGGAGGGCGCTGCCATGACGAAGCGAGCCGGAGAGAAGCTCTTCAAGCTCCTGGACATGTACGAGAGCCTCTGCGACGTGATCCCCAGCGTGGACAGAATCTTTCCAGAAGAGTACGTGGAGGAGATGAAGACAGAGATGTGTCTTGCCAAGTTCAGACTTGGCGAGGCTTCTATCTACATCTTCCGCGACCTGGAGAACCAGATTAAATCAGAGACCGCGAAAACCGCCGTCCCAGGTGGCGCAGTGCACCCCCTCACACGCTACATCATGAACTATCTCAACATAGCAGGGGTCTACAAGGACACCCTGGAGCAGGTTTTCAAGGAGCATACGAAGAATGAGCGTGCGGATTCCACAAGCAAGCCTGGTGAGCAGCAAAAGGAGGGGGGTTGGGACAATGAAGCTCCATCTCCATTCGCAATACAGGTGCTGAGGGTGATGGACTTGCTAGACTCGAGCCTGGAGGGGAAGGCGCGTCTGTACAAAGAGGTGGCGCTGAGCAACTTCTTCATGATGAACAACGGGAGGTACATTCTGCAGAAGATAAAGGGTTCTAGCGAGATGAGCAAGGTGATGGGCGACAACTGGATCAGGAAGAAGTCCTCGGAGCTGAGAAACTACCACAAGAACTACCAGAGGGAGACATGGAACAGGGTGCTGCAGTGTCTGAACCACGAAGGGTTGAACGTGAATGGGAAGGTGCACAAGCCGGTGCTGAAGGAGAGGTTCAAGAACTTCAACGCGTTGTTCGATGAGATTCACAAGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCCATCTCTGCAGTTATTATCCCGGCATATCGATCATTCATTGGGAGGTTTGCCCAGACTTTTGACCCAGGGAGACAGACAGAGAAGTATATAAAGTACCAAGCTGAAGACATTGAGACTTACATTGATGAGTTGTTTGATGGGAAGCCTCACCAGTCCCTTGGAAGAAGGAGAACATGA 2025 0.522 MENNDLVTNNAGDAQSPPDAKPDAAAAQAEPSSPTPHGHAKEEETAASTPPSLEKVAQEIDKFLRGTKNDGNAQNFEIPDFAERYLDLVEEKIMKYDAGEGKPKWGEGSEEDSWLVDSANRFSKLMTLVTDNHRNHEPDKINGAQVSMTNRISSIHQRLMTYLEEDFRFLIEESRIPTELDPGGNNQNSVDTKGKHHMAASEQQQEVVQEQEGGEQDTNFPGYSEETIASLNKIAGEMLFGGYESECCQVYIISRRNAFDEILQKLGLERISIDEMVTKVQWETLARDMIPAWINTLKQCATVYFPGERKLTEAVFAENHTVAAGLFSSLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMYESLCDVIPSVDRIFPEEYVEEMKTEMCLAKFRLGEASIYIFRDLENQIKSETAKTAVPGGAVHPLTRYIMNYLNIAGVYKDTLEQVFKEHTKNERADSTSKPGEQQKEGGWDNEAPSPFAIQVLRVMDLLDSSLEGKARLYKEVALSNFFMMNNGRYILQKIKGSSEMSKVMGDNWIRKKSSELRNYHKNYQRETWNRVLQCLNHEGLNVNGKVHKPVLKERFKNFNALFDEIHKTQSSWVVKDEQLQSELRVSISAVIIPAYRSFIGRFAQTFDPGRQTEKYIKYQAEDIETYIDELFDGKPHQSLGRRRT* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00542 674 MobiDBLite consensus disorder prediction 202 222 - -
Lapu1g00542 674 Pfam Exo70 exocyst complex subunit 292 659 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lapu1g00542 674 MobiDBLite consensus disorder prediction 1 15 - -
Lapu1g00542 674 MobiDBLite consensus disorder prediction 180 194 - -
Lapu1g00542 674 MobiDBLite consensus disorder prediction 177 222 - -
Lapu1g00542 674 SUPERFAMILY Cullin repeat-like 147 662 IPR016159 -
Lapu1g00542 674 Gene3D Exocyst complex component Exo70 106 671 - -
Lapu1g00542 674 PANTHER EXOCYST COMPLEX PROTEIN EXO70 83 663 IPR004140 GO:0000145|GO:0006887
Lapu1g00542 674 MobiDBLite consensus disorder prediction 1 75 - -
Lapu1g00542 674 MobiDBLite consensus disorder prediction 453 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00542 Lapu-Chr1 17338990 17341014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00542 2 674 EXO70 exocyst subunit family AT5G13990 46.906 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00542 K07195 - gmx:100820172 939.488