Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00535 ATGGAAGTGTTAAACCCAGTGGAAGGCAAGACCTATAGGCTTCCAGTTGGGTACAGGTTCGACCCCACTGATGAAGTTCTTGCAGGCTACTATCTCAGGAAGAGGATCACGGAACAGCTACTCCCTAATGACCTCATCCAGGACTATGATGTTCACCAGACTGAGCCTTGGGAGCTCCCAGGAGGTGGGAAGTATATGAATTGGCAGAGGTTTTTCTTCTATGATGTGAGGACCCATGTGTTTGAAAACCCTGACAAGAGAGATGCTGGGAAAGGCCAATGGGAAGTAACGGAGAAAGATCAGGTTGAGCTTCCTGGCGAACAAGTCTTTGCAAAGAGGAACGTTCTGGTTTTCTGGAAAGCCAAGGGCAATGGGCTTGCCAAAACAAATTGGGTGATGCATGAGTTTCGTCTTGCCCTAAAGTCAAATCCATCAAAGATGTCGGTTATGGCTGTGTGTCGCATTTTCGAGACCAAGGTCTCGAAAAGGGCAAAGAAAGCAAAACTGACTGAAGGGGTGGCCTCTAACAGGAGCAATGTTGAAGAAGCTACGGATGTCACAGCCACTGTCATTGATTTCACAGTGGAGAGTGGCACTGAGACTGGTCCTCCCTCTCCTGAGACCCCCTGA 630 0.4873 MEVLNPVEGKTYRLPVGYRFDPTDEVLAGYYLRKRITEQLLPNDLIQDYDVHQTEPWELPGGGKYMNWQRFFFYDVRTHVFENPDKRDAGKGQWEVTEKDQVELPGEQVFAKRNVLVFWKAKGNGLAKTNWVMHEFRLALKSNPSKMSVMAVCRIFETKVSKRAKKAKLTEGVASNRSNVEEATDVTATVIDFTVESGTETGPPSPETP* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00535 209 PANTHER NAC TRANSCRIPTION FACTOR 56 14 172 - -
Lapu1g00535 209 Gene3D NAC domain 23 163 IPR036093 GO:0003677|GO:0006355
Lapu1g00535 209 ProSiteProfiles NAC domain profile. 14 158 IPR003441 GO:0003677|GO:0006355
Lapu1g00535 209 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Lapu1g00535 209 SUPERFAMILY NAC domain 11 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00535 Lapu-Chr1 17184755 17186301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00535 14 208 NAC Transcription Factor Family AT1G65910 31.401 9.55e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu1g00535 NAM 2.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00535 - - vum:124846897 330.102