Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00519 ATGGCTTTCTCCGACTCTTCTTCTGGCCGCAACTCTCTCATCCCCTCCTTCCTCTACTCCTCTTCCTCCAAGACGCTTCCTCTTCACCGCATGCTCCACTCTACTGCCTTCGCCGCCGCCGCCGCCGCACACTCCGCACCGCCGGTCAACCTCGACGCCGGATCGCGCGACCTCATGATCCCATCTCCCAGCGAGTCACGCAAGATAGAGTTGTACTCCCCTGCCTTCTACGCCGCCTGTACTGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGACCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATCGACCCTGCTAAGTACAAGAACATCACGTCTGGGTTCGGGGTTTTGCTTAAGGAGCAGGGCTTCAGGGGCTTTTTCCGTGGTTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTCGGCTTCTATGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGCCCAGAGTATGCGAGCAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCGTCTGCGGAGGTTATTGCTGATGTTGCTCTTTGCCCCTTCGAGGCTGTGAAGGTCCGTGTCCAAACACAGCCTGGTTTTGCTAGGGGTTTGGCTGATGGGCTCCCAAAATTTGTGAAATCTGAAGGAACCTTGGGGCTGTACAAGGGAATAGTGCCTCTGTGGGGACGACAGATTCCATACACAATGATGAAATTTGCTTCCTTTGAGACCATAGTTGAACTGATCTATAAGCATGCCATTCCCACTCCAAAGAATGAGTGCAGCAAAAGCCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATGTTGCTGGTGTGCTTTGTGCAATCGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGCGGTACAGAAGCTTGGTTTGTGGGGTCTCTTCACCCGTGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGAGCCCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTTGGGCTGCCAACAACTGGTGGTCCAGCTCCTGCTGCAGCTCCAGCTCAGGCTCCTGGTTCTGAGCTAGCAAAGGCGTAG 1137 0.5189 MAFSDSSSGRNSLIPSFLYSSSSKTLPLHRMLHSTAFAAAAAAHSAPPVNLDAGSRDLMIPSPSESRKIELYSPAFYAACTAGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKNITSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAQAPGSELAKA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00519 378 Gene3D Mitochondrial carrier domain 75 353 IPR023395 -
Lapu1g00519 378 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 46 363 IPR044677 GO:0005315|GO:1990547
Lapu1g00519 378 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Lapu1g00519 378 Pfam Mitochondrial carrier protein 174 260 IPR018108 -
Lapu1g00519 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Lapu1g00519 378 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
Lapu1g00519 378 FunFam Phosphate carrier protein, mitochondrial 75 353 - -
Lapu1g00519 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Lapu1g00519 378 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00519 Lapu-Chr1 16766195 16770369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00519 7 370 Chloroplast and Mitochondria Gene Families AT5G14040 77.688 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00519 K15102 - gmx:548006 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00519 1 16766195 16770369 Lapu1g00519 1 16766195 16770369 ECH
Lapu1g00519 1 16766195 16770369 Lapu4g01044 4 26497975 26502170 PCT