Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu1g00503 | ATGGTTGCGCAAGCGCTGGAAGTTGTTGATCAGCATTTAATGGTTTCCACCAGGGTGGAGAAGAGTTCAGAATTGAAAACGCCTGCGACGAATGGCGTTAAAGGAGTTAAGAATTTAAAGAAATCGAAGGCGTCTTCTCCAACTCCGCCGAGGAGGTCGAGTGCTCGAATTCAAGCGCTGCAGAAAGCGGAGCAGGAGGCTCTTGCTGGACGAAATGCGCAGGTAGTTAAGGAAAAAGACAAATGCCAAAGTGAGGTTAAGGGAGGGAAGGGTAAGAAGCGCAGTAGAAAGAGTGGTGGTGAGGAGAGTATGGTGGTGGAAGAAGAGGCTGTTCTGCCGCCAAAGAAGAAGCCCGTGGCGTGCGGCAATGGTGAGGGGGAAGTACACAATGGGAAGGAGGAACCTGACAATGCGGTTGCTGCTTTTGGAGATAAGAGTGACTTGGTTAAAGTTAAAGAGACTATAAGATTGTTCAACAAACATTATCTTCAGTTTGTCCAAGTGGAAGAGAAGAGGTGTGGGAAGGCTGAGTCTGAGCAGAAAGCTGCTAAAAAGCTTTCTAAGAAGGCTTCAAAATCGAAGAAAGGTGCACCAACTGAAGATTCAAAGAACACTGCTAAACGACCAGATCTCAAGGCCATAACCAAGATGATGGAAAATAATGAGATACTGTACTCTGAGAAAAGAATTGGCAGCATTCCTGGTATTGAAGTTGGGTATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCATTGGTTAAATGGCATTGATTATATGGGCCAGTCCTATGCCAAAGCGTATAGCTATGAATTTCCAGTTGCTGTTGCTATTGTTTTGTCGGGCATGTATGAGGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGTCATAATCTGACTGGTGACAAGCGTCAAATCCGCGATCAAAAGTTGGAGCGTGGGAACCTAGCTCTCAAGAATTGTGCAGAGCAATGTGTGCCTGTTAGAGTGATTCGAGGTCATGATTCTTCAAGTAGTTACTCTGGTAAAGTATACACATATGATGGCTTGTACAAGGTTGTCCATTATTGGTCAGAGACAGGGATAGCTGGATTTAAAGTCTTTAAGTTTCGACTTAGGAGGCTTGAAGGGCAACCTACATTAACCACGAATCAGGTATATTTTACTAATGGACGTGTACCTCAATCTATAGCAGAAATACGAGGATTGGTTTGTGAGGATATCACCGGAGGTCAAGAAGATATACCCATTCCGGCTACAAATGTGGTAGATGATCCCCCTGTTCCACCCACAGGTTTCACATATTGTAAGTCTGTTAAGGTAGCAAAAAATGTGAAACTTCCCACTAATGCCACGGGATGCAAGTGCAAAGGCTCCTGTAATGACCCAACAACATGTGCATGTGCTTTGCGTAATGGCTCCGATTTTCCCTATGTATCTCGGAATGGTGGCAGGTTAGTAGAAGCTAAAGATGTAGTATTTGAATGTGGCCCCAAATGTGGTTGTGGTCCTGGTTGTGTGAACCGAACTTCTCAAAAAGGACTTAGATATCGTCTGGAGGTTTTCCGGACTGCCAAAAAAGGATGGGCTGTCAGATCCTGGGATTTTATACCTTCTGGAGCACCAGTTTGTGAGTACACAGGAATACTTGCTAGAACGGAAGACATGGACAGCGTGTTGGAAAACAATTATATTTTTGAGATAGATGGCTTGCAAACGATCAAGGGCCTTGGTGGTAGAGAGAGGCGGTCACAAGATGGAGATATTCCTGAAGATATTTTGAACAAATATGATGATCAAAGTTCCGAAAGTGTGCCAGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATCTGTTTGTTCAGTGTGTTTTGAGCACACACGATGATTTGAGGTTGGCTCGTGTCATGCTGTTTGCTGCGGACAACATACCACCTATGCAGGAATTAACGTATGATTATGGTTATGCGCTTGATAGCGTGCTGGACTCTAATGGGAAGATCAAGCAAATGCCATGCTATTGTGGAGCCGCAGACTGCAGGAAGCGATTATTCTGA | 2118 | 0.4424 | MVAQALEVVDQHLMVSTRVEKSSELKTPATNGVKGVKNLKKSKASSPTPPRRSSARIQALQKAEQEALAGRNAQVVKEKDKCQSEVKGGKGKKRSRKSGGEESMVVEEEAVLPPKKKPVACGNGEGEVHNGKEEPDNAVAAFGDKSDLVKVKETIRLFNKHYLQFVQVEEKRCGKAESEQKAAKKLSKKASKSKKGAPTEDSKNTAKRPDLKAITKMMENNEILYSEKRIGSIPGIEVGYQFYSRAEMVAVGFHSHWLNGIDYMGQSYAKAYSYEFPVAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQKLERGNLALKNCAEQCVPVRVIRGHDSSSSYSGKVYTYDGLYKVVHYWSETGIAGFKVFKFRLRRLEGQPTLTTNQVYFTNGRVPQSIAEIRGLVCEDITGGQEDIPIPATNVVDDPPVPPTGFTYCKSVKVAKNVKLPTNATGCKCKGSCNDPTTCACALRNGSDFPYVSRNGGRLVEAKDVVFECGPKCGCGPGCVNRTSQKGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILARTEDMDSVLENNYIFEIDGLQTIKGLGGRERRSQDGDIPEDILNKYDDQSSESVPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHDDLRLARVMLFAADNIPPMQELTYDYGYALDSVLDSNGKIKQMPCYCGAADCRKRLF* | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu1g00503 | 705 | MobiDBLite | consensus disorder prediction | 41 | 60 | - | - | |
Lapu1g00503 | 705 | Gene3D | - | 213 | 400 | IPR036987 | - | |
Lapu1g00503 | 705 | ProSiteProfiles | Post-SET domain profile. | 689 | 705 | IPR003616 | - | |
Lapu1g00503 | 705 | SMART | G9a_1 | 226 | 387 | IPR003105 | - | |
Lapu1g00503 | 705 | Gene3D | SET domain | 409 | 705 | IPR046341 | - | |
Lapu1g00503 | 705 | ProSiteProfiles | SET domain profile. | 526 | 675 | IPR001214 | GO:0005515 | |
Lapu1g00503 | 705 | MobiDBLite | consensus disorder prediction | 193 | 210 | - | - | |
Lapu1g00503 | 705 | ProSiteProfiles | Pre-SET domain profile. | 461 | 523 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Lapu1g00503 | 705 | SMART | preset_2 | 414 | 510 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Lapu1g00503 | 705 | SUPERFAMILY | PUA domain-like | 213 | 405 | IPR015947 | - | |
Lapu1g00503 | 705 | Pfam | SET domain | 537 | 675 | IPR001214 | GO:0005515 | |
Lapu1g00503 | 705 | SMART | set_7 | 526 | 681 | IPR001214 | GO:0005515 | |
Lapu1g00503 | 705 | SMART | PostSET_3 | 689 | 705 | IPR003616 | - | |
Lapu1g00503 | 705 | MobiDBLite | consensus disorder prediction | 73 | 114 | - | - | |
Lapu1g00503 | 705 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR | 41 | 698 | - | - | |
Lapu1g00503 | 705 | ProSiteProfiles | YDG domain profile. | 231 | 383 | IPR003105 | - | |
Lapu1g00503 | 705 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 51 | 705 | IPR025794 | GO:0016571 | |
Lapu1g00503 | 705 | Pfam | SAD/SRA domain | 230 | 387 | IPR003105 | - | |
Lapu1g00503 | 705 | SUPERFAMILY | SET domain | 411 | 681 | IPR046341 | - | |
Lapu1g00503 | 705 | Pfam | Pre-SET motif | 418 | 518 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Lapu1g00503 | 705 | MobiDBLite | consensus disorder prediction | 179 | 210 | - | - | |
Lapu1g00503 | 705 | MobiDBLite | consensus disorder prediction | 19 | 138 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu1g00503 | Lapu-Chr1 | 16470735 | 16486628 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu1g00503 | 217 | 705 | EF-hand Containing Proteins | AT5G13960 | 66.937 | 0.0 | 702 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Lapu1g00503 | SAD_SRA | 2.5e-50 | CL0178 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu1g00503 | K11420 | - | gmx:100795584 | 1113.6 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu1g00503 | 1 | 16470735 | 16486628 | Lapu1g00503 | 1 | 16470735 | 16486628 | ECH |