Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00501 ATGTCTGTCTATGCTCCCAGTTCCTATGGTGGAGCTAAACTCGTAGGGATGGTAAAGGGACGAGATGCAACAAAGGCAGAAATCTTAGCTGCTACAGAAATGGCAAATGCTCCCATGTTCATTAGAAGCTTGCAGCAGGGTTGTGAATCCAATGTAGGAGAACTTGGATCTAAATTATCTGGCGAACAAAAGCAGCATGTGGCAATTGCAAGAGCAACAGCGAAAAATCCAAAAATAATACTACTAGATGAAACCAACAGTGCTCTAGATGCTGAGTCTGAAAAGTAG 288 0.4271 MSVYAPSSYGGAKLVGMVKGRDATKAEILAATEMANAPMFIRSLQQGCESNVGELGSKLSGEQKQHVAIARATAKNPKIILLDETNSALDAESEK* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00501 95 Pfam ABC transporter 49 85 IPR003439 GO:0005524
Lapu1g00501 95 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 94 IPR027417 -
Lapu1g00501 95 Gene3D - 21 95 IPR027417 -
Lapu1g00501 95 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 9 95 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00501 Lapu-Chr1 16452549 16454063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00501 17 95 Calmodulin-binding Proteins AT2G36910 56.250 4.70e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00501 K05658 - gmx:100818527 102.064