Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00493 ATGTCAAGTACTCTTGCAGCAATATTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATTGCTATACTTATATGGTTTTGCTTGTCTCGCCAGAGGAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCACAGGTGGGAAGACATGGTGCAATTGAGTTGCCTATACGAGATACTAGGCGTTTTGAGATGGAAGAACTATCTCTTGCCACAAAAAGTTTCAGCGACAAAAATTTGATTGGAGAAGGGAAATTTGGGGAGGTTTACAAGGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAAAAACGCCGTGGACTCGCTAGTCAGGAATTTGTGGATGAGGTACGTTATCTGTCATTTATTCACCACCGGAATCTCGTCAGTCTTTTAGGCTACTGCCAGGAGAATAATCTTCAGTTTCTTATATATGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGAGCTGGTCAACAATTGCCAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTCTGAGTCCCCGTTTGGTGCATAAGAATTTCAAAACCGCTAATGTTCTCGTGGATGAAAACTTCATTGCTAAGGTGGCAGATGCTGGACTCCGCAATTTTTTGGGGAGAGTTGACATCGCAGGCTCGTCTTCTCAATTGGCAACAGATGAAATATTCCTTGCATCAGAGGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGTATACAGCTTTGGGGTATTTTTGCTGGAATTGTTAAGTGGGAAAGAAGCAACAGAATCACCATTTCCGGACTCTAATCAGAATCTGGTTGAATGGGTGGTAAGCAATGAAGACCGTGGCATGATGTCTTACACCATTGATAGGAGATTGGAGAGCCGTTTTACAGCTGAAGGAATGGAAGATTACATCATGCTCATGATCAGATGCTTAGACCCTTCAAGTGAGAGAAGACCTGCCATGAGCTATGTGGAAATGGAACTTGATAGGATCCTAGAGAAGGAAATGAACTTGACAACAATCATGGGAGAAGGAACCCCAACTGTGACTCTTGGAAGCCAGTTATTCAAATCAACAACGTGA 1137 0.4354 MSSTLAAIFGGAAGAVALVGIAILIWFCLSRQRNVSRTSETGSSDPSQVGRHGAIELPIRDTRRFEMEELSLATKSFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRRGLASQEFVDEVRYLSFIHHRNLVSLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQLPEKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRVDIAGSSSQLATDEIFLASEVREFRRFSEKSDVYSFGVFLLELLSGKEATESPFPDSNQNLVEWVVSNEDRGMMSYTIDRRLESRFTAEGMEDYIMLMIRCLDPSSERRPAMSYVEMELDRILEKEMNLTTIMGEGTPTVTLGSQLFKSTT* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00493 378 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Lapu1g00493 378 Gene3D Transferase(Phosphotransferase) domain 1 150 363 - -
Lapu1g00493 378 FunFam Protein kinase superfamily protein 150 363 - -
Lapu1g00493 378 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 13 355 IPR047117 -
Lapu1g00493 378 FunFam Protein kinase superfamily protein 42 149 - -
Lapu1g00493 378 ProSiteProfiles Protein kinase domain profile. 77 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00493 378 SUPERFAMILY Protein kinase-like (PK-like) 58 343 IPR011009 -
Lapu1g00493 378 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Lapu1g00493 378 Pfam Protein tyrosine and serine/threonine kinase 81 345 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00493 Lapu-Chr1 16273626 16278138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00493 20 351 Receptor kinase-like Gene Family AT1G30570 35.440 3.74e-60 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lapu1g00493 PK_Tyr_Ser-Thr 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00493 - - gmx:100305436 681.404