Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00469 ATGGGAACCTCTGGCACAGAATCTCCATCACTTCTCAAAGATATGAAGGTGACCATCCTCCAAACTTCAACCATTTTTCCATCCAAAGAAACAGAGAAGAAGTCCTTGTTCCTATCAAACATCGACAAGATAGTAAACTTTGACGTGCACACGGTTCACTTCTTCGCAGCAAACAAAGATTTTCCACCGCAGAAGGTGGCTGAGAAGTTGAAGAACGCCCTAGAGGATGTTCTTGTGCACTATGACTTCTTAGCTGGAAGATTGAGTCAGAACCCAGAAACCAAAAGATTAGAGATAGATTGCAACTCAAAGGGTGGTGTGTTTGTGGTGGCTTCAAGTGAGTACAAGCTAAGTGAGATTGGAGACTTGGCTTATCCCAATCCAGCTTTTGAACAATTTGTTCAAAAGAATGAAGATTTCCTTAAACCAGGCGATCTTCCACTGTGCGTTGCACAGCTGACCTCCTTTGAGTGTGGTGGCTTCGCAATGGGGTTCACAACCAGCCACGCAGCCTTTGACGGACTTAGCTTCAAAACCTTTTTGGACAACCTTGCCGCACTGGCTGCTAACAAGCCCTTGGCTGTGATACCTTGCCACGACAGGCACCTCCTGGCCGCACGATCCCCTCCACGTGTCACCTTCCCGCACCCCGAGTTGATCGAGCTCCGTTACCGACCCACAGGCACGGGATCCAGCGTCTTTGATGCTTCCAAAGAAGAACTGGACTTTAGGGTTTTGAAACTAACCTCAGACAACATCCTGAGCCTTAAGGAGAAAGCAAAGGGAAGCACCAACGCCCGTGTCACTGGGTTTAACGTTATCACCGCCCATATATGGAGGTGCAAGGCCTTGTCAGCACCGTATGACCCTACCAGAACATCTACCATACTATTCGCCGTGGACATACGTTCGAAACTGAACCCTCCGTTGCCAAAAGCCTTCCTCGGCAACGCCGTGTTAACGGCGTTTGCAGCTGCGAAGTGCGAGGAGTTGGAAAAGGGTGAGTTCTCAAGGTTGGTGGAGATGGTGAAGGAAGGTGCAGAGAGAATGAGTGATGAGTATGCGAGGTCTATTATAGACTACGGAGAGGTGCATGATGGGTTTCCACATGGGGATGTTTTGGTGTCTTCGTGGTGGAGATTAGGGTTTGAAGAGGTGGAGTATCCGTGGGGGAAGCCCAGGTATTGTTGCCCTGTGGTTCATCGCTGCAAGGATATTATTCTGTTGTTTCCTTCCTTTGGTGGTGATGATGATGGGATAAATATAATAGTGGCTCTTCCTCCCAAGGAAATGGAAAATTTCGAGACCCTCTTTCACATGTTCTTGAACTGA 1332 0.4835 MGTSGTESPSLLKDMKVTILQTSTIFPSKETEKKSLFLSNIDKIVNFDVHTVHFFAANKDFPPQKVAEKLKNALEDVLVHYDFLAGRLSQNPETKRLEIDCNSKGGVFVVASSEYKLSEIGDLAYPNPAFEQFVQKNEDFLKPGDLPLCVAQLTSFECGGFAMGFTTSHAAFDGLSFKTFLDNLAALAANKPLAVIPCHDRHLLAARSPPRVTFPHPELIELRYRPTGTGSSVFDASKEELDFRVLKLTSDNILSLKEKAKGSTNARVTGFNVITAHIWRCKALSAPYDPTRTSTILFAVDIRSKLNPPLPKAFLGNAVLTAFAAAKCEELEKGEFSRLVEMVKEGAERMSDEYARSIIDYGEVHDGFPHGDVLVSSWWRLGFEEVEYPWGKPRYCCPVVHRCKDIILLFPSFGGDDDGINIIVALPPKEMENFETLFHMFLN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00469 443 Pfam Transferase family 15 436 - -
Lapu1g00469 443 Gene3D - 11 220 IPR023213 -
Lapu1g00469 443 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 437 - -
Lapu1g00469 443 Gene3D - 230 440 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00469 Lapu-Chr1 15636686 15640233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00469 15 435 Monolignol Biosynthesis Gene Families AT5G48930 30.159 1.44e-54 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00469 K13065 - gmx:100780971 718.383