Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00458 ATGGGGTTTCAGTGTCTCTTTAGTTTCTTGCTCCTGCTACTGCCTGCACTCTCTTCCTCCCAGTATCTTGGGAACTACCTTCTAACTAATCGTAAGATATTCCCCAAACAAGAAGAACCCATTACCTCTTATGCTGTCATTTTTGACGCTGGTAGCACTGGGAGTCGAGTGCACGTCTTCCATTTTGACCAGAACTTAGATCTCCTTCACATTGGCAATGATCTCGAGTTTTACAAAAAGGTCACACCCGGTTTGAGTTCGTATGCTGATTATCCTGAAAAAGCTGCATTATCTTTGATTCCGCTTTTAGAGGGAGCTGAAAATGTTGTCCCTCAGGATCTGCACCCTAAGACACCCCTTAAGCTCGGAGCGACGGCAGGTTTAAGGCTTTTGGAAGGGGATGCTGCTGAAAATATATTGCATGCGGTTAGGGATATGTTCAAGAACAGAAGTGACCTGAACGTTCAACCAGATGCAGTGGCTATAATTGATGGAACCCAAGAAGGTTCTTATCTATGGTTGGCAGTGAATTATCTATTGGGGAGGTTGGGAAAAAGGTTTGCAAAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCTGTCTCAAGGAACACTGCCAAAAACGCTCCAGTGGTACCTGATGGAGAGGATCCATACATAAAGAAACTATATGTCAAGGGCAAAAAATACGATCTCTATGTTCACAGTTACTTGCGCTATGGTAGAGAAGCAGCTCGTGCTGAGATTTTGAAGGTCACAGATGGTTCGGCTAACCCTTGCGTTTTGGCTGGATATGATGGGAGTTATACATATTCAGGAGCCGAGTATGCAGTGTACCCTCCGATTTCGGGGTCCAGCTATGATGCATGCAGAGAGCTAGTACTTGAGGCTCTCAAAGTGAATGAGCCATGTGCCCATCAAAATTGCACATTTGGTGGGATATGGGACGGTGGAAAAGGAAGTGGACAGAGAACTATTTATGCTACTTCATCTTTCTATTACCTGGCCTCAAACGTTGGTCTCATTGATCCGAAGGCACGCAATGGCATTGTTCGTCCTGTGGATTTTGAAAACCTGGCTAAGCGAGCTTGTGGAATAACATATGAAGATGCCAAATCCAGTTATCCACTTCTTACTAAAGAAAGAGTTCCATTTGTATGCATGGACAGTGCATACCAGTATACTTTGCTGGTTGATGGATTTGGCCTTGATCCTTGGCAAGAGATTACAGTGGCTATTGAAATTGAGTACCAAGATGCTTCTGTGGAAACAGCATGGCCTCTTGGCACAGCCATTGAAGCCATATCAGCATTGCCTAAATTTGAACGGTTAATGTATTTTATTTAA 1365 0.4403 MGFQCLFSFLLLLLPALSSSQYLGNYLLTNRKIFPKQEEPITSYAVIFDAGSTGSRVHVFHFDQNLDLLHIGNDLEFYKKVTPGLSSYADYPEKAALSLIPLLEGAENVVPQDLHPKTPLKLGATAGLRLLEGDAAENILHAVRDMFKNRSDLNVQPDAVAIIDGTQEGSYLWLAVNYLLGRLGKRFAKTVGVVDLGGGSVQMAYAVSRNTAKNAPVVPDGEDPYIKKLYVKGKKYDLYVHSYLRYGREAARAEILKVTDGSANPCVLAGYDGSYTYSGAEYAVYPPISGSSYDACRELVLEALKVNEPCAHQNCTFGGIWDGGKGSGQRTIYATSSFYYLASNVGLIDPKARNGIVRPVDFENLAKRACGITYEDAKSSYPLLTKERVPFVCMDSAYQYTLLVDGFGLDPWQEITVAIEIEYQDASVETAWPLGTAIEAISALPKFERLMYFI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00458 454 Gene3D - 44 438 - -
Lapu1g00458 454 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 10 444 IPR000407 GO:0016787
Lapu1g00458 454 FunFam Apyrase 1 164 422 - -
Lapu1g00458 454 Gene3D Exopolyphosphatase. Domain 2 164 422 - -
Lapu1g00458 454 Pfam GDA1/CD39 (nucleoside phosphatase) family 42 445 IPR000407 GO:0016787
Lapu1g00458 454 CDD NBD_sugar-kinase_HSP70_actin 46 205 - -
Lapu1g00458 454 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 163 178 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00458 Lapu-Chr1 15367379 15371244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00458 14 443 Calmodulin-binding Proteins AT3G04080 51.508 5.21e-152 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00458 K14641 - gmx:100781628 697.197