Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00456 ATGCCATTATTTCATCAACCATATATCATTCTCAGTGCTGAATATTTTAAAGAATTGGTTTCTTTTACGTCTGCACATTTGAGTGGTTTGAGAAAGGTTTTACTATGGTCAAGAAAAGGGACTAAAAACATGGACTTCTTAACCCTCTTTACTCTTCCACTCTTGTTGCTATTGCCTGCACTCTCTTCTTCCCAACATGTTGGGAACAATATCTTGCTCACTCATCGCAAGATATTCCCCAAACAACAAGCACTAACCTCGTACGCTGTGATCTTTGATGCTGGTAGCACTGGTAGCCGCGTCCATGTCTTTCATTTCGACCAGAACTTAGATCTTCTTCACATTGGCAACGAGCTTGAGTTCTATGATAAGGTCACACCTGGTTTGAGTGCATACGCAGATAATCCTCCACATGCTGCCGAATCTCTGCTTCCACTTTTGGAGGAAGCTGAAAGTGTTGTCCCTCAGGACCTCTACCCCACCACACCCGTTAAGCTTGGGGCTACTGCAGGTTTAAGGCTTTTGGATGGGGATGCTTCTGAAAGGATATTGCAAGAGGTTAGGGATTTGCTGAAGAACAGAAGTACCTTTAATGTTCAACCAGATGCAGTAGGTATAATCGATGGAATCCAAGAAGGTTCTTATCTATGGGTGACAATCAACTATATATTGGGAAATTTGGGGAAAAAGTTTTCAAAGACAGTGGGTGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCTGTCTCAAGGAACACTGCCAAAAATGCTCCACTACCACCAGATGGAGAGGATCCTTACATAAAGAAGCTTGTACTCAAGGGAAAGAAATATGACCTCTATGTTCATAGTTATTTGCGTTATGGTAGAGAAGCATCTCGTGCTGAGATTTTGAAGGTCACTGGTGGTTCTGCTAACCCTTGTATTTTAGCTGGTTTTGATGGGATCTACACATATTCTGGAGAAGACTATAAGGCCTTTGCTCCTATTTCTGGCTCCAACTACCATGAATGCAGAAAGATAGTTCTTCAAGCTCTCAAAGTAAGCGAGTTTTGCCCCCATCAAAATTGTACTTTTGGGGGCATATGGAATGGTGGAAGGGGAAGCGGGCAAAACACTCTTTTCGGCACTTCATCTTTCTACTATCTGCCTTCAGAGGTTGGTATTGTTGATCCAAATAAACCAAACTCCAAAATTCATCCCTCGGATTTAGAGACTGAAGCTAAGAGAGCTTGTGAAACAAAATTTGAAGATGCCAAATCCACTTATCCACTTCTTGCAGAGGATAGACTTCCATATGTATGCTTGGACCTTACATACCAATATGCATTGTATACTGATGGATTTGGCCTAGATCCATTGCAAAAGATCACAGTGGCAAATGAAATTGAATATCAGGATGCTCTTGTGGAAGCAGCATGGCCTTTAGGCACTGCTATAGAAGCCATATCTTCATTGCCTAAATTTGATCGATTAATGTATTTTATTTAA 1497 0.4142 MPLFHQPYIILSAEYFKELVSFTSAHLSGLRKVLLWSRKGTKNMDFLTLFTLPLLLLLPALSSSQHVGNNILLTHRKIFPKQQALTSYAVIFDAGSTGSRVHVFHFDQNLDLLHIGNELEFYDKVTPGLSAYADNPPHAAESLLPLLEEAESVVPQDLYPTTPVKLGATAGLRLLDGDASERILQEVRDLLKNRSTFNVQPDAVGIIDGIQEGSYLWVTINYILGNLGKKFSKTVGVVDLGGGSVQMAYAVSRNTAKNAPLPPDGEDPYIKKLVLKGKKYDLYVHSYLRYGREASRAEILKVTGGSANPCILAGFDGIYTYSGEDYKAFAPISGSNYHECRKIVLQALKVSEFCPHQNCTFGGIWNGGRGSGQNTLFGTSSFYYLPSEVGIVDPNKPNSKIHPSDLETEAKRACETKFEDAKSTYPLLAEDRLPYVCLDLTYQYALYTDGFGLDPLQKITVANEIEYQDALVEAAWPLGTAIEAISSLPKFDRLMYFI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00456 498 Pfam GDA1/CD39 (nucleoside phosphatase) family 86 489 IPR000407 GO:0016787
Lapu1g00456 498 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 46 487 IPR000407 GO:0016787
Lapu1g00456 498 FunFam Apyrase 1 208 466 - -
Lapu1g00456 498 Gene3D - 88 482 - -
Lapu1g00456 498 CDD NBD_sugar-kinase_HSP70_actin 90 249 - -
Lapu1g00456 498 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 207 222 IPR000407 GO:0016787
Lapu1g00456 498 Gene3D Exopolyphosphatase. Domain 2 208 466 - -
Lapu1g00456 498 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 88 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00456 Lapu-Chr1 15339098 15349670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00456 87 487 Calmodulin-binding Proteins AT3G04080 56.965 1.86e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00456 K14641 - gmx:100781628 796.578