Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00438 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGAGATCTTCAGCCTGGTCCACTACCTGTTGAGCAAGGAGAGAATTGGGCACAACCTGCTCAGAATCGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATCTGGACCCTGAACCTTGTGAAGTGTTACCAGAACCTGTTGCTTTAGGGGCTCCGGAACCAGTTTACAATCACGTAGAGGTAGTGGCCAACAATAATATTGCGATGGAGGGTGGAAGTGCAGATAAGGTGGCTGTAGCTGAGGAAGAACCCAGCACAACTCCGGTCCCTGAGAGGGTACAAGTTGGTAACTCTCCTATATATAAGATAGAAAGGAAATTGGGTAAGGGTGGTTTTGGTCAAGTTTATGTTGGTCGAAGGGTAAGTGGTGGCTCTGATCGAACAGGTCCTGATGCAGTTGAGGTTGCACTTAAGTTTGAGCACAGAAACAGTAAAGGTTGCAATTATGGACCTCCTTATGAGTGGCAAGTTTACAGTACTCTGAATGGTTGTTATGGAATTCCCTGGGTTCATTACAAGGGCCGACAAGGAGATTTCTACATTTTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGTCAATCAATGTCACCTAGTATGGCTGCGTGCATTGCCGTAGAGGCTATATCAATTCTTGAGAAGCTCCACTTGAAAGGGTTTGTGCACGGAGATGTAAAACCAGAAAACTTTCTGCTTGGCCAACCTGGATCTGCTGATGATAAGAAACTATATCTTATTGATCTTGGTCTGGCTTCTAGATGGAAGGATGCATCATCTGGTCTACATGTTGATTATGACCAGAGACCTGATATATTCAGGGGAACGATAAGGTATGCTAGTGTACATGCACATTTGGGTAGAACTGGAAGTCGAAGGGATGATCTTGAGTCTCTGGCATACACTCTAATATTTCTCATAAAAGGGAGATTACCTTGGCAGGGTTATCAGGGTGACAATAAAAGCTTTCTTGTTTGTAAGAAAAAGATGGCCACTTCCCCAGAGTTGATGTGTTGCTTCTGCCCTGCTCCATTTAAGCAGTTTCTTGAAGCTGTTACTAATATGAGATTTGATGAGGAGCCAAATTATTCCAAGCTCATATCGTTTTTTGAAAGCTTGATCGAACCATGCACTCCATTGAGACCTATCAGAATAGATGGAGCTTTAAAGGTTGGTCAAAAAAGAGGTAGAATGCTTATAAATCTGGAAGAAGATGAACAACCTAAGAAGAAAGTGCGATTGGGGAGTCCTGCTACTCAATGGATATCAGTGTATAATGCACGTCGTCCCATGAAGCAGAGATATCACTATAATGTTGCAGACACTAGGCTCCGGCAACATGTCGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTGGCCTCTGCAGCGAATTTGTGGGCTCTAATCATGGATGCAGGAACAGGTTTTTCTTCACAAGTTTATGAGTTATCACTGGCCTTCCTGCACAAGGATTGGATAATGGAACAATGGGAGAAAAATTACTATATCAGTTCAATCGCTGGTGCAGTTAACGGGAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTACACGCAGCAGTCATACAAAGTCAGTGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCGATGACTACTGCTGGCAGTCGCTGGGGTGTTGTTATGTCCAGGAATTCTGGGTATTCTGATCAGGTTGTGGAGATTGACTTTTTGTATCCAAGTGAAGGAATCCATCGTCGATGGGAGAATGGTTACCGGATTACTTCTATGGCTGCTACTACTGATCAGGCAGCCTTTATACTGAGCATACCAAAACGCAAATTGCTTGATGAAACTCAGGAGACGCTTCGTACATCTGCTTTTCCTAGTACCCATGTTAAGGAAAAATGGGCCAAGAATCTCTACATTGCCTCTATATGTTATGGGCGAACTGTTTGCTAG 2127 0.4448 MPELRSGARRSKRLGDLQPGPLPVEQGENWAQPAQNRTRRRVGGGRGRGGNATAVGKGPSPAVPTRRTAAGRGRGARLIDLDPEPCEVLPEPVALGAPEPVYNHVEVVANNNIAMEGGSADKVAVAEEEPSTTPVPERVQVGNSPIYKIERKLGKGGFGQVYVGRRVSGGSDRTGPDAVEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGSADDKKLYLIDLGLASRWKDASSGLHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMATSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISFFESLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGIEDGLYISCVASAANLWALIMDAGTGFSSQVYELSLAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNSGYSDQVVEIDFLYPSEGIHRRWENGYRITSMAATTDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVC* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00438 708 SUPERFAMILY Protein kinase-like (PK-like) 147 435 IPR011009 -
Lapu1g00438 708 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Lapu1g00438 708 Pfam Protein kinase domain 147 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00438 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lapu1g00438 708 SMART serkin_6 147 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00438 708 ProSiteProfiles Protein kinase domain profile. 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00438 708 PANTHER CASEIN KINASE-RELATED 147 671 - -
Lapu1g00438 708 FunFam Casein kinase 1-like protein 119 467 - -
Lapu1g00438 708 Gene3D Transferase(Phosphotransferase) domain 1 112 464 - -
Lapu1g00438 708 CDD STKc_CK1 147 421 - -
Lapu1g00438 708 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00438 Lapu-Chr1 14990276 14998191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00438 121 307 EF-hand Containing Proteins AT5G66210 27.551 5.61e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lapu1g00438 Pkinase 7.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00438 - - gmx:100801967 1384.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00438 1 14990276 14998191 Lapu1g00438 1 14990276 14998191 ECH