Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00423 ATGAATTTCTCCAACTTCGAAAGCACTGGTTTCATTATCATAAACTCGAACAACACGCAGAAGGTCTGTTTCAATAAGACTACTTACCACGGTTCCGGCCTTTGGCTAGAAAATTCCTTGGAGAAAACACTTCCTTCCTTTGTCCTGCAATTCGCCATTATCCTAGCTATCAACCGTCTTTTGATCATTGTTGCAGAACAATACCATGTACCTCGTATTGTTGCCAATATTTTTACTGGTTTTCTGTTAGGTCCATCTGTTATGGGACGTTGGAAAACTTTTCTGGAACAGTTATTTCCTTTCAGCAACATGATACCATTGGAGACGGTGGGTTCGGTGATCCTTGTTTACTACGTGTTCTTGATGGGCCTAGAGATAGACTTGAAACTAATAACGAGGTTGAACAAAAAGGCCACAGTTATAGCCATTGCAGGCACCATCTTCCCCATACCAATAGGGTTTGGCTTGTACTACTTGCTTGTCACCGACATGGGGAGAAAACCTTTGTCCAGTGCCAACGTTAAACCAAAGGGTGCAATATTATGGGGACTCGCCCTTTCTTGCAGCAGTGAGTTCCCTGAGATAGCAAAGATCCTTTCAGACCTTAAGCTTCTCCTCACGGAGAATGGACAACTGGCTCTCACAGCTTCTCTCCTTAACGACCTGGTTTCATTTTCCCTTCTTGCTTTGGCCCTAACACAATTCTACCAGGCTTCTGTGGTATCGTTTGTGATCACTGTGGTGATTGTGTTGGTGTGTTTTCTGGCACTTGACCCCTTTTTCAAGTGGCTATTCAACAATGTGGGAACCGCGGATCGAGAGTTCCTGGAGTCACAAGTCATATTTGTGCTGCATATGGTTTTGGTCATTGGGTTGTTAACTGATGGATTGGGCGTGCTTTCGATAACGGGGGCTTTCTTTTTTGGTGTTGTGATCCCTCAGGGGTCGCTTAACAATGCGGTGCAGGAGAAGGTGCAGGATTTTGTGGGTGTGTTCATGATGCCTTTGTTCTTTGTGGTTGTTGGAGAGAGGATTAGGATCCAAGACTTGTCCTTGTACACACAGTTCACAACTGTGGTGGTGGTGGTTTTGTTGGCCTTGGTGACGAAGATTGCGTGCATTATGGCTGTCACTTGGTTCTACCAGATGCCGCACATAGAAGGATTTTCCCTTGCACTGCTCATGAATACTAAAGGAATAATGCCATTGATCATTCTCTGCACTGGCAGGGACAGACTCGAACTGGACAACCAAACATTTGGGGTGATGGTGTTGGCATGCTGGTTGATGACAGTCCCAGTAGGACCTGTCTCATCAGCTTTAACAAAAGCTTTGAAAAGCAGAATGGCTATGGGAGGGCAACGCAGGATGCATGACACACAACCAGACTCACCCCTCAGACTACTAGCATGCATCCACACAAAGCGCGATGCCAACGTGATTATCGACCTCTTAAAAGCTTCGTGTCCCTCTGTGAGAACCCCAATCCAAGTTCTAGCAGTGGAACTGAACAAAATAACCAACCGCCCCGCCTCATCACTCATCATAAGGGACGCTCGAAAACCATCCTTCGCCTCAAAGTCCTTGACGCTAGACTCCGAAGACACCCTAGGATGCTTCGACAATCTCAGCCAAGCCATCTTCGCAGAGAAAATGAGAATCATCTCAGACTACAACTCCATGCACAAGGACATTCTCTACCTCGCAAGACGCAGAGGTGTGAAACTTATCTTATCCACATTCCACAAACAACCAACCTACGATGGTTTAGGAGCAGGTGCTGCAACTGCAAGAGCTGTCAACATCATCAACCGCGACCATGCAAGCAAAGACGAGAAGAAAGTGGTGTTAGAGAGTCTAGTTAAGGATGCACCGTGTTGCGTGGCCATATTTGTGGACAGAGGGGTGACTCACAACCATTCCAAGGAGCTACGTGTGGCTATGTTCTACATTGCTGGTGCCGATGACCGTGAAGCTCTTTCTTATGCATGGAGGATGACTAGGAGTTCTGAGGTGAATTTAACGTTGGTGAGGCTCGTTTGGGAGAACCCTAATGACGAGTTTGATGAATCGGATAAGGAGTTCATCAAGGGGTTTATGGAACAAATGGGAGACTCGCCAAGGGTGAGGTATGTGGAGAAGGTGGTGAGGGATGAGAAGAAAACAGTGAGAGTTTTGAACAAGATAGGGAACAAAGGGTTTGATTTGTATGTGTTAGGAAGAGGGCATGGGAGGAAGATGTCATTGGCACAAACGGTGGATCCTGTGTTGGAGGAGCCTGTGTTAGGACCTCTTGGAGATGCTTTGACGGATCTGAACTCTGCGGCTGAGACCTCTATTTTGATATTCCAAAGACAGGTTGAACATGTGGAAGGGAAGCATGTGAGGTCTGCATCATCTCCATATGAAAAAGCGTTTGATTGCATGATGGAGCAGAAGTTGATGTGCCCTTCAACGAGCTCTCCAGTGATTTTATGTCAGATTCCTTGA 2490 0.4635 MNFSNFESTGFIIINSNNTQKVCFNKTTYHGSGLWLENSLEKTLPSFVLQFAIILAINRLLIIVAEQYHVPRIVANIFTGFLLGPSVMGRWKTFLEQLFPFSNMIPLETVGSVILVYYVFLMGLEIDLKLITRLNKKATVIAIAGTIFPIPIGFGLYYLLVTDMGRKPLSSANVKPKGAILWGLALSCSSEFPEIAKILSDLKLLLTENGQLALTASLLNDLVSFSLLALALTQFYQASVVSFVITVVIVLVCFLALDPFFKWLFNNVGTADREFLESQVIFVLHMVLVIGLLTDGLGVLSITGAFFFGVVIPQGSLNNAVQEKVQDFVGVFMMPLFFVVVGERIRIQDLSLYTQFTTVVVVVLLALVTKIACIMAVTWFYQMPHIEGFSLALLMNTKGIMPLIILCTGRDRLELDNQTFGVMVLACWLMTVPVGPVSSALTKALKSRMAMGGQRRMHDTQPDSPLRLLACIHTKRDANVIIDLLKASCPSVRTPIQVLAVELNKITNRPASSLIIRDARKPSFASKSLTLDSEDTLGCFDNLSQAIFAEKMRIISDYNSMHKDILYLARRRGVKLILSTFHKQPTYDGLGAGAATARAVNIINRDHASKDEKKVVLESLVKDAPCCVAIFVDRGVTHNHSKELRVAMFYIAGADDREALSYAWRMTRSSEVNLTLVRLVWENPNDEFDESDKEFIKGFMEQMGDSPRVRYVEKVVRDEKKTVRVLNKIGNKGFDLYVLGRGHGRKMSLAQTVDPVLEEPVLGPLGDALTDLNSAAETSILIFQRQVEHVEGKHVRSASSPYEKAFDCMMEQKLMCPSTSSPVILCQIP* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00423 829 PANTHER CATION/H + ANTIPORTER 22 787 - -
Lapu1g00423 829 Gene3D - 45 450 IPR038770 -
Lapu1g00423 829 Pfam Sodium/hydrogen exchanger family 55 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00423 Lapu-Chr1 14739603 14743819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00423 16 787 Antiporter Super Family AT2G13620 32.349 1.62e-130 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00423 K26731 - gmx:100780176 1238.02