Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00422 ATGGTGAGCATTCAATCTCGATACACTGTCTTTCCCTCGGAAACCACTCCCAATGAAAAACTCTTTTCCTTGTGCGAGCAAATCAAGCTTCGTACTCATGCGCCACTCCTTTACGTCTTCAAGCCACACCCTCATCACGATGCATCGAATTTTGTAAACACTCTCAGGCACTCTCTTAGCCAAGCCTTGACAATCTATTACCCAGTTGCGGGTAGGTTGAATTGGATCCAAGGGGGGCGATGGGAGCTTCATTGCAATGCCAAGGGTGCACAAGTCTTGGAAGCCATTTGCAAAGATGTGAGTTTGGATGATCTGGGTGATTTTGTGCCTACCCATTTGGTGTCACAGCTCATACCAAACATCGATTATGCTGTTCCCATTGAGGACACACCCTTGTTGGTTGCGCAGCTTACGAGGTTCCCATGTGGTGGCGTTACCATTGGGGTGGCTTTGTGTCGAGGGACCATCGACGGAATCGCAACCATGCGGTTCATGAACACGTGGGCCAAGTTGGCTCGGAGGGAGAAAGTGGAAATGGCACCACTGCATGATCGAAATGTTTTGAATTCGTACAAGGCTCATTCGGGGTCGCACGATCATTCGGAGTTTCACAGTCCTCCTCCTTGGTTAGGACCCTTGGGGAAAGACACCAAGGTGGATGTCGCAATAGTGAAGCTCACAGGTGAACAAGTGAAGAAGCTCAAGCACAAGGGGAATCACGTTAACACAAACAGTCATAGTTCACAACCTTATTCAACTTTTGAGGTTGTTTCAGGGTACTTGTGGAGGTGCGTGAGTAAAGCACGTTATGCAGGGAAAAGGGATCAACCGACGAGGTTGACCACTTTGGTTAATTGCAGGCATCGAATGAGGCCACCTCTTCCTGTTGATTATGCAGGGAATACAGCATTTCCCACTGTGACACCAACATGCACTTTTGGTGAAATGATGCACAGGCCTTTGAGTTATGCGGTTGGGAAGGTTAGGGTGGCACTTGAAAGAGTGACGGGGGAGTTTGTGGAGTCTGCACTGGATCACATAGCAAGGGAGAAAGACATGAATTTGGTCAGGTACAATTTTCACTACCCTGCCCCAAGTGTGCATAAGGGACCATACAAGGGGAACCCGAATCTTTTTGTTGTGAGTTGGATGAATTTCTCGTTCAAGGATGCAGATTTTGGATGGGGAGAACCCTTGTATTTTGGCCCCGGGTACATGGATTCTGAAGGAAAAGCATTTCTTATGAATGAGGCTAATGGGGATGGCCTCATTGTGGCCATTTCCTTGGAATCATCTCACATGGATGCTTTCAAGAAATTTTTTTATGGTGATATCGAAGAGGAATCTCTCATTTCCAGACTGTGA 1365 0.474 MVSIQSRYTVFPSETTPNEKLFSLCEQIKLRTHAPLLYVFKPHPHHDASNFVNTLRHSLSQALTIYYPVAGRLNWIQGGRWELHCNAKGAQVLEAICKDVSLDDLGDFVPTHLVSQLIPNIDYAVPIEDTPLLVAQLTRFPCGGVTIGVALCRGTIDGIATMRFMNTWAKLARREKVEMAPLHDRNVLNSYKAHSGSHDHSEFHSPPPWLGPLGKDTKVDVAIVKLTGEQVKKLKHKGNHVNTNSHSSQPYSTFEVVSGYLWRCVSKARYAGKRDQPTRLTTLVNCRHRMRPPLPVDYAGNTAFPTVTPTCTFGEMMHRPLSYAVGKVRVALERVTGEFVESALDHIAREKDMNLVRYNFHYPAPSVHKGPYKGNPNLFVVSWMNFSFKDADFGWGEPLYFGPGYMDSEGKAFLMNEANGDGLIVAISLESSHMDAFKKFFYGDIEEESLISRL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00422 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 441 - -
Lapu1g00422 454 Pfam Transferase family 1 441 - -
Lapu1g00422 454 Gene3D - 207 443 IPR023213 -
Lapu1g00422 454 Gene3D - 1 205 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00422 Lapu-Chr1 14722871 14724268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00422 2 442 Monolignol Biosynthesis Gene Families AT5G48930 36.000 1.40e-84 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00422 K13065 - gmx:100775549 740.725