Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00421 ATGGTTACCATTCACAGTTCCCGTCTTGTGGTGCCCTCAGAGACCACGCCAACTTCAAACACCTCACTCTCCCTATGCGACCAAATCAAGCTTCCCAACCATGGATCTCAGCTCTATTTCTACGCCAACACACGCATCACCGACGATTCATCCTTCGATTCTGCGATCCACACTCTCTCAACCTCTCTCAGCAAAACCCTCACTGTCTTCCACACTTTTGCCGGTCGCTTGGGTCGGATCCACGGTGGCCGCTTCCAGCTTCTCTGCAACGCCAAAGGGGTACTCCTCATAGCAGCCACATGCAACACTGAACTCAGTTTTGAAGAACTGTGTGAGTTCGCTCCCGCCTACGCTGCCCCGAAGATCGACTACGATGTCCCGATTGAGGATATTCCATTGCTGGTTGCGCAGGTCACGAGGTTCCCCTGTGGTTTCATCACAGTTGGAATCGCCATGTGCCGCGTTTTCCTCGATGGAACTTCACTTTCTAGCTTCATTAACTCGTGGGCGAAATTCGCTAGAGGGGAAAGTTTAGATTCTGGTTTGATTCCTTTATTTGATCGATCGAAACTAGATTCGTTCAAACTGAATAAACCACCGCGATTTGAACATCTCGAGTTTCTGCCACCGCCCCTTTGGACAAAACGGGATGAGAATATGCAACATGAACTTGGTACGGCCGTGTTGGTACTGACAAAAGGGCAAGTTCAGAAACTGAAGAATAAAGCGAGTGACTTTGGAAGTGGGTACGGTAAGGTTCCCGTAGGAGGTTATACTAGCTTTGAGGTCATAAGTGGTCACCTGTGGAGGTGTATTTGCAAGGTGCGTTATTCAGGGGATGTGTGTCAACCAACGAGGATGACCACTTTGGTTAATTGTAGAAACCGTTTGAGGCCATCTCTCCCAACTGCTTTTTTTGGCAATGCAACATTTCCTACTGTGACAGAAACTTGTTCCTTTGATGACATTATGCTGAAGCCTCTTGGCTATGCTGTGAGGAAAGTGAGGGAAGCGATTGAGAGAATGCGTGATGAGTATGTTAGGTCTGCTCTTGATTACATAGCATGTGTGGAGGACATGGATTTGTTCAGGGACACGTTTTATAACTCTGCTGGGAAAGGTAGGGAAGACCCTAATTTGAATGTGGTTGGTTGGACCAATTTTTCGCATTTTGCGACGAATTTTGGGTGGGGGAAACCAGATTGTGTGCTTCCCGGGAACATTAATTCTAATGGTAAGGCTTTCCTTTTGGACACTGCAAATGGTGACGGCTTCGTTGTAGCTGTTTGTTTGAAGGCATCGTACGTAGATGCGTTGAAGAAGTTGTTCTATGAGGATATAGAGAAGCATGTTTCTAAATTGTGA 1365 0.4703 MVTIHSSRLVVPSETTPTSNTSLSLCDQIKLPNHGSQLYFYANTRITDDSSFDSAIHTLSTSLSKTLTVFHTFAGRLGRIHGGRFQLLCNAKGVLLIAATCNTELSFEELCEFAPAYAAPKIDYDVPIEDIPLLVAQVTRFPCGFITVGIAMCRVFLDGTSLSSFINSWAKFARGESLDSGLIPLFDRSKLDSFKLNKPPRFEHLEFLPPPLWTKRDENMQHELGTAVLVLTKGQVQKLKNKASDFGSGYGKVPVGGYTSFEVISGHLWRCICKVRYSGDVCQPTRMTTLVNCRNRLRPSLPTAFFGNATFPTVTETCSFDDIMLKPLGYAVRKVREAIERMRDEYVRSALDYIACVEDMDLFRDTFYNSAGKGREDPNLNVVGWTNFSHFATNFGWGKPDCVLPGNINSNGKAFLLDTANGDGFVVAVCLKASYVDALKKLFYEDIEKHVSKL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00421 454 Pfam Transferase family 1 444 - -
Lapu1g00421 454 Gene3D - 213 446 IPR023213 -
Lapu1g00421 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 433 - -
Lapu1g00421 454 Gene3D - 1 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00421 Lapu-Chr1 14701948 14703496 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00421 2 445 Monolignol Biosynthesis Gene Families AT5G48930 32.967 1.54e-68 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00421 K13065 - gmx:100819383 645.195