Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00405 ATGGCTGGGCAATCAAACCATGAACTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATCGTGGACATTGTGCCCAATCTCAAAATGGAACCTCTCAATTTCATTTCTGGAGATTTTGGCCCGTTTACGCCACAGATTGTTACTCAAGTACCGCTGTGGTTGGCCATTGCTCTCAAGAAGAGAGGCAAGTGCTCCATTCACCCTCCCCAATGGATGTCTGTTGAGAAGTTGAGTCAAGTTTTGGAGGCAGAGCGAGACTCTCAAGAGATGTCAGATCAATTGCCATTTCATTATGTGGAAATCTCAAGACTTCTTTTTGATCATGCACGTGATAACATTCCCGATGTATATATGGTGAGGTCTCTAATTGAAGATATAAGAAATGTAAGGTTTCATAAAGTTGAAACTGACTTGGAAGCATTTAATGGTCGTACAATTGCTGTTAAGATAAAAAATTTGTCTGCAATGGAAGTTAATATTGTTCGTCCATTTATCGGAAGAGCTTTACAAGCATTTTATAAACATGATAGTCCAGAGTTGATACCAGACCCGGAGAGAGTTTCTGATAGGAGGCCCCAAGTTGTCAACAATGCTCCTAGGATTATATTTGCTTTTGCAGAGACAACTAAGAAGATAGTCATCATGTATGGGACCCTTTTGGTTACATCTCTTCTAGAATTATAG 699 0.4034 MAGQSNHELSLFSAEELEFIAEDEIVDIVPNLKMEPLNFISGDFGPFTPQIVTQVPLWLAIALKKRGKCSIHPPQWMSVEKLSQVLEAERDSQEMSDQLPFHYVEISRLLFDHARDNIPDVYMVRSLIEDIRNVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSPELIPDPERVSDRRPQVVNNAPRIIFAFAETTKKIVIMYGTLLVTSLLEL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00405 232 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Lapu1g00405 232 FunFam DNA replication complex GINS protein PSF2 78 193 - -
Lapu1g00405 232 SUPERFAMILY PriA/YqbF domain 12 71 - -
Lapu1g00405 232 CDD GINS_B_Psf2 13 74 - -
Lapu1g00405 232 Gene3D - 78 185 - -
Lapu1g00405 232 Pfam GINS complex protein 53 162 IPR021151 -
Lapu1g00405 232 SUPERFAMILY GINS helical bundle-like 73 181 IPR036224 -
Lapu1g00405 232 CDD GINS_A_psf2 66 182 - -
Lapu1g00405 232 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 204 IPR007257 GO:0005634|GO:0006260
Lapu1g00405 232 PIRSF GINS_PSF2 2 206 IPR007257 GO:0005634|GO:0006260
Lapu1g00405 232 Gene3D - 12 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00405 1 147 Core DNA Replication Machinery Family AT3G12530 68.707 9.53e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00405 K10733 - gmx:100780528 392.504