Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00402 ATGGCAAATAGACACCATCCCTCAGTGTTTTTGGTGTTAATTACTTTCTTACTTTCTATCTATTACTCAGAGCAATTACAATCTTCTCACTCTCAGACTCTTCTCAGAATTCAGCAGCTATTGAACTTTCCTGCCGCTTTGAGCAACTGGAACAACGACACAGATTTTTGCAACACAGATTCAAACTCTTCTCTCACTGTAGTGTGCTATGAAGACATCATAACACAGCTTCACATAATAGGTGAAAGAAGAGATTCACCTCTCCCTAGAAATTTCTCAATAAATTCCTTTGTCACAACACTAGTAAGGCTTCCCAGTTTGAAAGTCCTCACGTTGGTTTCTCTGGGTATTTGGGGTCCTTTGCCTGGTAAGATAGCTCGTTTGTCATCCCTGGAAATAGTTAACATGAGTTCCAATTTTCTCTACGGTTCCATTCCCCAGGAACTTTCTTCACTGACAAATCTCCAAACCCTCATTTTTGACAACAACATGCTCGCCGAACCATTTCCTCCTTGGTTTGATTCACTTCCAGCCTTAACTGTGCTAAGTTTGAAGAATAATTTGTTCAATGGATCTCTACCGAATTCCCTTGGTAATGTGGAGAATTTGAGAGCTCTTTCACTTTCTCATAATCACTTATATGGGGTGCTTCCTGATTTCAGTCGTTTGACGAATCTTCAAGTGCTTGAATTGGATGATAATGCTTTTGGACCTCAGTTTCCTAAACTTGGTAACAAGTTGGTTACACTAGTGCTAAAAAACAACAGGTTCAGGGATGGTATTCCTGCTGAATTGAGCTCATACTATCAGCTTGAACGTTTGGATATATCATCAAATGCATTTGTGGGGCCATTTCAGCCAGGATTGTTGTCACTTCCTTCTATTACTTATCTGAATATTTCTGGTAACAAATTAACCGGGATGCTTTTTGAGAATATGTCTTGCAATTCAGAGCTTGATGGAGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCTAAATGTTTAGTGTCAAATTCAAGTGATAGGACTTTCCTGTATGCTAGAAATTGTCTAGACACCGCGAATCAAAATCAGCAGCCGCAGCCTTTTTGCCACACCGAGGCCTTAGCTGTCGGAATATTACCTGAGAGAAAGAAGCACAGACAAGTATCTAAGCTAGTTCTTTCCCTAGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTTTTTTGCTAATTTTCTTTATTGTTAGAAGAGGAAATGCTAGAATCAAAATGAAGAATCCTCCAACAAGATTAATATCAGAAAATGCTGCTTCTGGTTACACTTCTAAGTTGTTTTCTGATGCAAGGTATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCCTGCCAACTTATCGAAGTTTCTCATTGGAAGAGATTGAGGTAGCTACAAACTACTTTGACACAGCTTCTTTAATGGGTGAAGATTCTTATGGGAAGATGTACAGAGGTCAGCTGAAGAATGGTTCGTTTGTTGCTATTCGATGTGTAGAAATGAAAAAGAAATACAGCACTCAAAACTTTGTGCACCACATAGAGCTGATATCGAAACTCAGGCATCGTCATTTAGTCAGTGCTATTGGACACTGCTTTGAATGTTCTTTGGATGATTCCAGTGTCAACAAAGTATTTCTTGTCTTTGAATACGTACCAAACGGCACACTCAGGAATTGGATCTGTGATGAGAATGCTAGAAAATGTTTGAGTTGGACCCAACGCATTGGAGCTGCAATTGGAGTGACAAAAGGAATCCAGTTTTTGCATACAGGGATTGTCCCTGGTGTATATTCCAACGATCTCAAGATAGAAGATGTTTTATTGGATCAGAATCTTGTAGCGAAAATCAGCAGTTATCACCTGCCTTTGTTATCTAACATGGGGAAGGTTCGACATGGAAATTCTTCAAGTGGATTAAAAAGTTCTAGCAACAATAAAAGTGTAAAGTATGAAGATAAGTCTGATATATACGACCTTGGAGTGATACTACTCGAGCTCATTCTAGGAAGGCAAATAAAGACAGCGAATGATGCAGACGCTTTTAGGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAAGAGGGTAGGAGGAGTGTTGTTGACACAGCAATTCGCAAGGCATGCTTAGATCAATCACTGAAGACGATGATGGAGATATGTGTGAGGTGTCTGGTTAAAGAGCCAGAAGATAGGCCCTCTATAGAGGATGTTTTGTGGAACTTGCAGTTTGCATCTCAAGTGCAGGATGCATGGAGAGGGGATTCACAAAGTAGTGAAGGGTCACCAGGCTCAGAATCTCGAGGACTTCCCTTTCATTAG 2346 0.4037 MANRHHPSVFLVLITFLLSIYYSEQLQSSHSQTLLRIQQLLNFPAALSNWNNDTDFCNTDSNSSLTVVCYEDIITQLHIIGERRDSPLPRNFSINSFVTTLVRLPSLKVLTLVSLGIWGPLPGKIARLSSLEIVNMSSNFLYGSIPQELSSLTNLQTLIFDNNMLAEPFPPWFDSLPALTVLSLKNNLFNGSLPNSLGNVENLRALSLSHNHLYGVLPDFSRLTNLQVLELDDNAFGPQFPKLGNKLVTLVLKNNRFRDGIPAELSSYYQLERLDISSNAFVGPFQPGLLSLPSITYLNISGNKLTGMLFENMSCNSELDGVDLSSNLLTGSLPKCLVSNSSDRTFLYARNCLDTANQNQQPQPFCHTEALAVGILPERKKHRQVSKLVLSLGIVGGTLGGVALFLLIFFIVRRGNARIKMKNPPTRLISENAASGYTSKLFSDARYISQTKKLGAVGLPTYRSFSLEEIEVATNYFDTASLMGEDSYGKMYRGQLKNGSFVAIRCVEMKKKYSTQNFVHHIELISKLRHRHLVSAIGHCFECSLDDSSVNKVFLVFEYVPNGTLRNWICDENARKCLSWTQRIGAAIGVTKGIQFLHTGIVPGVYSNDLKIEDVLLDQNLVAKISSYHLPLLSNMGKVRHGNSSSGLKSSSNNKSVKYEDKSDIYDLGVILLELILGRQIKTANDADAFRDLLQASLGADEEGRRSVVDTAIRKACLDQSLKTMMEICVRCLVKEPEDRPSIEDVLWNLQFASQVQDAWRGDSQSSEGSPGSESRGLPFH* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00402 781 Pfam Protein tyrosine and serine/threonine kinase 481 747 IPR001245 GO:0004672|GO:0006468
Lapu1g00402 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 766 - -
Lapu1g00402 781 Gene3D Ribonuclease Inhibitor 27 244 IPR032675 -
Lapu1g00402 781 Gene3D Transferase(Phosphotransferase) domain 1 560 768 - -
Lapu1g00402 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 244 - -
Lapu1g00402 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 245 362 - -
Lapu1g00402 781 MobiDBLite consensus disorder prediction 760 781 - -
Lapu1g00402 781 SUPERFAMILY L domain-like 50 353 - -
Lapu1g00402 781 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Lapu1g00402 781 ProSiteProfiles Protein kinase domain profile. 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00402 781 Pfam Leucine rich repeat 172 213 IPR001611 GO:0005515
Lapu1g00402 781 Gene3D Ribonuclease Inhibitor 245 361 IPR032675 -
Lapu1g00402 781 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 393 762 - -
Lapu1g00402 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Lapu1g00402 781 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Lapu1g00402 781 SUPERFAMILY Protein kinase-like (PK-like) 459 754 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00402 Lapu-Chr1 14247671 14254620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00402 43 779 Miscellaneous Gene Families AT3G03770 61.456 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lapu1g00402 PK_Tyr_Ser-Thr 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00402 - - gmx:100807539 1400.96