Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00401 ATGTCTAATCAACCACAAGACAATGTTGATGGTCACAGTTCCAGAGTAACTATGAGTGCCCATCAACCAAAAGAAGTGAATGAAGGAACTTCCACTAGAATAAATGATCATGGAGGCAATGTCTCAAAGCGTGTCAGGTCACGAGCATCGTCTCCTCCATGTGCGGCATTAGTATACAAGGTGTTTGGTGCAAACAATTTGTCAAAACTATTATTGGAAGTTGAAGCAATTCATCGCAAAGATGCGATAAATTCCATGTGCTACGAGCTCAGGCGAGGCTAG 282 0.4255 MSNQPQDNVDGHSSRVTMSAHQPKEVNEGTSTRINDHGGNVSKRVRSRASSPPCAALVYKVFGANNLSKLLLEVEAIHRKDAINSMCYELRRG* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00401 93 MobiDBLite consensus disorder prediction 1 38 - -
Lapu1g00401 93 MobiDBLite consensus disorder prediction 1 47 - -
Lapu1g00401 93 Pfam Lateral organ boundaries (LOB) domain 56 89 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00401 Lapu-Chr1 14209762 14210127 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00401 49 89 AS2 family AT1G16530 48.780 2.19e-07 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu1g00401 LOB 5.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00401 - K23677 pvu:PHAVU_001G115200g 89.3521