Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00383 ATGGCACCCTTCGTCTCCAACTCCAAGGTTCAATCTAGAGTACTTCTTCTTGTCCTCAACTCCTCTTTCATCTTCCTCTTCTGTCTCCTTCTAAAACTCTATCTCCACCCTCTTAACTCAAATCCTCAAGGCCAGTCCAATGGCTCTCTCCTCACAATCTTCAACCACGCAAGGTTGTTCAGAGATGTTAGTGTTGAAGGCTGCACTGATATACACAATTACTCAGATTTTGGCTCCAAGTGCTTATATGTCCAAACTCATCTTGAGTGCAGGTCAAAAGGATACATCAACTATCTTCAAATCTTCTATTGCAACTCAGGAAAATTCCCGATTTTGGGACAAGCCCTCCTTGCCTTGTGGCTTGTGGTGTTGTTTTATCTGTTGGGTGACACAGCTTCAAACTACTTTTGCAGTTCCTTGGAGGGTTTGTCCAACATCTTGAGGCTCTCCCCCACCATTGCAGGAGTGACCCTTCTTTCTCTGGGAAATGGCGCTCCTGATTTCTTTGCTAGCGTTGTGTCTTTCACAGGATCATCCAGCAATGATGCTGTTGGAATCAACAGCATCCTAGGAGGGTCTTTCTTTGTGTCGTGTGCTGTCTTGGGGGTCATAAGCATTCTGGTTAGCCCAAATCAGGTTGAGGTTGATAAGGCCAGTTTCATCAGGGATGTCCTTTTCTTCCTTTTCTCTCTTCTCATCCTCCTTATCGTCATTTACATTGGTAAAATAACTTTGTTTGCTTCAATCTGCTATGTTTCTATCTACTTCCTCTACGTCTGTGCCGTCTCAGCCACACATCTCATCTATGGAGGGGACACAACAGATGTAAGGCAATATTCAATGTCTTCTGATGAGTCACTAGCGTCTAGCATACCTTTGTTGGGCTATGTTGATGAAGAAAAACAAAGTTTGGCAGAGATAGTGGTGGTTGAAGATAAGGAACAAAAGCCAGCTAGTAGTTTTGGTCATAATTCATTGTTTGGTTGCGTTTACTTGGGAAAGTTGGTACAAGTACTAGAACTACCTCTTTGCTTACCAAGAAGGCTTACCATTCCAGTGGTGAGTGAGGAGAAGTGGTCAAAGCCATTTGCAGTAATATCTGTCACATTAGCACCAGTTTTACTAGCAGTTCTTTTCAATACTCAAAGTGAAAATGTGGGTTCAAGGAGCAGCCTAGTTATATACATAGTAGCTGCTTTGATTGGGATAGTTTTGGGCAACATGGCATGCGTGACAACGGATAGGTGTAGCCCACCAACCAAGTCCTTGTTTCCTTGGCTGGCTGGTGGCTTTGCCATGAGTGTAACATGGACTTACATAATTGCTGCAGAGCTAGTTTCTGTGTTGGTTTCAATCGGAAGCATAATTGGGGTTAGCCCTTCAATGCTAGGACTAACTGTCCTAGCTTGGGGGAACTCACTTGGGGACTTCATAGCAAATGGTGCCATGGCCATGAATGGAGGGGCAGATGGTGTCCAAATGGCCATATCTGGCTGCTATGCTGGTCCTATGTTCAATACCTTGATGGGTTTGGGCTTGCCCCTGGTTCTCTCAGCTTGGTCTCAGCATCCAGACCCTTATGTCATTCCTAAGGATCCTTCACTCTATGAGACCCTTTTGTTCTTGATGGGAGGGCTTCTTTGGGCCCTTGTGATCTTGCCAAAGAAGAGTATGAAGTTGGATAAATCATTAGGGGTAGGGCTATTGAGTGTGTATCTCTGCTTTTTGGTAATAAGGATTGCTCTGGCTTTTGGGGTTGTCAAATTCTAA 1770 0.4441 MAPFVSNSKVQSRVLLLVLNSSFIFLFCLLLKLYLHPLNSNPQGQSNGSLLTIFNHARLFRDVSVEGCTDIHNYSDFGSKCLYVQTHLECRSKGYINYLQIFYCNSGKFPILGQALLALWLVVLFYLLGDTASNYFCSSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGSSSNDAVGINSILGGSFFVSCAVLGVISILVSPNQVEVDKASFIRDVLFFLFSLLILLIVIYIGKITLFASICYVSIYFLYVCAVSATHLIYGGDTTDVRQYSMSSDESLASSIPLLGYVDEEKQSLAEIVVVEDKEQKPASSFGHNSLFGCVYLGKLVQVLELPLCLPRRLTIPVVSEEKWSKPFAVISVTLAPVLLAVLFNTQSENVGSRSSLVIYIVAALIGIVLGNMACVTTDRCSPPTKSLFPWLAGGFAMSVTWTYIIAAELVSVLVSIGSIIGVSPSMLGLTVLAWGNSLGDFIANGAMAMNGGADGVQMAISGCYAGPMFNTLMGLGLPLVLSAWSQHPDPYVIPKDPSLYETLLFLMGGLLWALVILPKKSMKLDKSLGVGLLSVYLCFLVIRIALAFGVVKF* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00383 589 Gene3D - 149 293 IPR044880 -
Lapu1g00383 589 Gene3D - 360 581 IPR044880 -
Lapu1g00383 589 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 23 588 - -
Lapu1g00383 589 Pfam Sodium/calcium exchanger protein 118 261 IPR004837 GO:0016020|GO:0055085
Lapu1g00383 589 Pfam Sodium/calcium exchanger protein 427 580 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00383 Lapu-Chr1 13883688 13886282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00383 76 588 Antiporters AT5G17860 52.724 8.64e-175 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00383 K13754 - gmx:100811635 897.501