Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00382 ATGTTGTCTAATACCCCAGTTTCTGTCCCCAAACGCATGGGGCTCAGAGCAAGTTTCACCTTGTTCCTGAACATCTCTTTCCTCATGATCGTGTTTTGTGTTTCTCTTATTGCCCACTTCCACTCTTCAGATCATGTTGTTCTGAGGAGAAACCGGTTAGGCTTGAGGGGTGGTGAACAAGATTGCAAAAGTTTCCACAAATTGAGGGACTCAAAAGCCAAGTGCTTCTACCTGAAATCCAATGATCCGTGTGTTTCTCAGGGTTATGTTGACTACCTTTACCTTTTCTATTGCAAATTGGGGGGTTTACCTCTATTGGGTCATAGTCTTTTGTTTCTTTGGCTTTTGGTTCTGTTCTACCTGTTGGCCAACACTGCCTCTGAGTACTTTTGTCCTTCTCTTGAGAACTTGTCCAAATTGCTTAGGCTCTCTCCCACAATAGCTGGGGTGACTCTTCTCTCTCTTGGAAATGGTGCTAGTGATGTTTTTGCCACCCTTGTCTCTTTCAAGGGTAGTGGGACCCAGGACATTGGTTTCAACACTGTGATTGGAGGTGCTTCCTTTGTTTCCTGCGTTGTGGTTGGAATAGTGAGCATTTCAATTAGGCATAGGGGGATCAGGGTCAAGAAGTGGGCCTTGGTTAGAGACATTTGTTTTCTTCTCTTGGTTCTTCTCTGTTTGTTGATAATTTTTATCACTGGTGAGGTCAGTGTTCCTGGGGCAATTTGTTTTTGCTTGATGTATGTGGTGTATGTGGTGGTTGTTTATGTTTCATCTAACCAAGGGAAGAAAGGTGTGTGTGGAGACGCTGATACTGAAAGTGATGGTGAGTTGAGTCACGGTGGCAATGATTTAGGTGTCCCTTTGCTCAGTGAGGTGGAGAAAGGACTTGCAAATACAGCTCAGGAATTTGACGGGAAAATTGGGAGGAAATGTTGGTGTTTAAAATCTTCAATTTGTAGAATGTTACTTTATGTCCTGGAGATGCCACTTTACTTGCCTAGGAGATTGACAATCCCTGTTGTTTGTGAAGAGAGATGGTCCAAAGGGTATGCAGTTTGTTCAGCTATGCTAGCACCACTTCTAGTGTCTTCCTTGTGGGTACCAAACAAGGAAAACAGCTTCAACTCAAGCCTTATTGTTTATGGAATTGCATTGTTGGTTGGGATTACATTAGGGGTAACAACATTTTTCACAACCAATGTGTCAAGCCCTCCAAGGAAGTTCTTGTTTCCTTGGCTTGCAGGAGGATTTGTGATGAGTGTGACTTGGAGCTACATTTCAGCTCAAGAATTGGTGGGGTTGTTGGTTTCACTTGGTTACATATGTGGAGTTAGTCCTTCAATTCTGGGCCTAACAGTTCTTGCCTGGGGGAACTCAATTGGGGATTTGGTGACAAATTTGACAATGGCTGTGTATGGTGGATCAGAAGGTACTCAAATAGCAATATCAGGGTGTTATGCTGGCCCTATCTTCAATATAGTGGTTGGGTTGGGCTTATCTCTTGTGAGCACTACTTTGTCTGAGTACCCATTTTCTGTTGTGATCCCTAGAGACCCATATCTTTGGGAGACTTTGGCACTTTTGGCAGTTGGATTGATTTATGCTCTTATTGTGTTGATTAGAAGAGATATGAAGCTTGATGCACTATTGGGAATAGGACTCTTGCTTATTTACTTCATTTCTCTCTTTCTGAGGCTGATTCAGACACTTGGATCTCTCCAATTTCAGGATATGATAAACTCACTCTTCATAAGATGA 1761 0.4282 MLSNTPVSVPKRMGLRASFTLFLNISFLMIVFCVSLIAHFHSSDHVVLRRNRLGLRGGEQDCKSFHKLRDSKAKCFYLKSNDPCVSQGYVDYLYLFYCKLGGLPLLGHSLLFLWLLVLFYLLANTASEYFCPSLENLSKLLRLSPTIAGVTLLSLGNGASDVFATLVSFKGSGTQDIGFNTVIGGASFVSCVVVGIVSISIRHRGIRVKKWALVRDICFLLLVLLCLLIIFITGEVSVPGAICFCLMYVVYVVVVYVSSNQGKKGVCGDADTESDGELSHGGNDLGVPLLSEVEKGLANTAQEFDGKIGRKCWCLKSSICRMLLYVLEMPLYLPRRLTIPVVCEERWSKGYAVCSAMLAPLLVSSLWVPNKENSFNSSLIVYGIALLVGITLGVTTFFTTNVSSPPRKFLFPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSIGDLVTNLTMAVYGGSEGTQIAISGCYAGPIFNIVVGLGLSLVSTTLSEYPFSVVIPRDPYLWETLALLAVGLIYALIVLIRRDMKLDALLGIGLLLIYFISLFLRLIQTLGSLQFQDMINSLFIR* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00382 586 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 317 575 - -
Lapu1g00382 586 Pfam Sodium/calcium exchanger protein 112 256 IPR004837 GO:0016020|GO:0055085
Lapu1g00382 586 Pfam Sodium/calcium exchanger protein 414 566 IPR004837 GO:0016020|GO:0055085
Lapu1g00382 586 Gene3D - 143 268 IPR044880 -
Lapu1g00382 586 Gene3D - 352 567 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00382 Lapu-Chr1 13868947 13871175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00382 22 575 Antiporters AT5G17850 51.155 2.09e-168 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00382 K13754 - gmx:100787016 841.647