Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00377 ATGCTTTCAGGATATGTTGAGCATGAGGCCACTAAAGATGATGAATATGATGATTCACATATAGAAGATGAATCAGAAACTTTGTCTGATATTGATGATTGTGATGTTGATGAGTATCTTCACAATGAGGAGGAAAAGCATATCAAGAAGATACTGTGGGAAAGAGTTAACAGAGTGTATGTTATGGAACAAGCAGCCAAGGAAGCAGTTGCAGCAGCTAATAAGAAAGCTTTTGAGGGAAATTTTGGAAACTGTTCAGAGGATTTACTAGTAGAAAGAGAGCTTGCTGCATCTTCTGCTGCAGCTGCGGCGAAATCCAGAAAGGGAATGAAAAAGAGACGTGCCCATGAAGCAAAAAATATTGCACCAACTCAATCTGCTGCAGAGGCTTTTGGCCAAATGTCTAATGAAAAAAGGAGTCTCAAATCTAAAGTCAATTTAGATCGCCTGGAGGAATTATTTAATGATATGGAGGAGGATGAAATGGGATCAGCGGATGATTACTGA 507 0.3925 MLSGYVEHEATKDDEYDDSHIEDESETLSDIDDCDVDEYLHNEEEKHIKKILWERVNRVYVMEQAAKEAVAAANKKAFEGNFGNCSEDLLVERELAASSAAAAAKSRKGMKKRRAHEAKNIAPTQSAAEAFGQMSNEKRSLKSKVNLDRLEELFNDMEEDEMGSADDY* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00377 168 Gene3D Single helix bin 20 71 - -
Lapu1g00377 168 MobiDBLite consensus disorder prediction 16 30 - -
Lapu1g00377 168 MobiDBLite consensus disorder prediction 104 135 - -
Lapu1g00377 168 Pfam Brf1-like TBP-binding domain 29 155 IPR011665 -
Lapu1g00377 168 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00377 Lapu-Chr1 13722009 13754381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00377 29 147 Inorganic Solute Cotransporters AT2G01280 37.815 3.99e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00377 K15196 - vra:106753841 228.794