Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00371 ATGGAAGATGAGAGGCAGAAAGAGGCAAAGAGTCCAAGGCATGGCCCCGAGAAGAGTGAAGCGGTTCGGTCAAGGTGGACTCCGAAGCCGGAACAAATTCTCATACTCGAATCCATCTTCAACAGTGGCATGGTGAACCCTCCAAAAGATGAAACCGTCAGAATAAGAAAACTGCTTGAGAAATTCGGCACTGTGGGTGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGATGCAGCAGGCAGCCGCCACCGCTGCTGTGGTTAACCAGCCTCAGTCCCAGCCCCAGCCTCAGCTTCAACCTCAGCCTCAGCCTCAGCTTCAGCCTCATGGTCTTGTTGGTGGTGGTGCAATTCAGCATGATCATCATACTCAGGTTAACCTTGTTGCAAGTGAAAGTACTACTTCAAACATGGGTCTTGGTTCTTGTGTTTCTTATGATCTCCTAGGTGGTTCTTCTTCATCATGTAGTGGTGGTGGTGGACAACAAGGGATTGCTGGTTTCTTTTCTGTTTCTTCTCCTCAAATGGGTTTTCCTGAAATGATTGACAACAACTCACCTGCACCATCAGTTTTGTTCCCTCCTTTTGATCCAAATTTGAGCTTCCAGACTGGATATGGGGGTACCAATATTTCAGCATTCATCACAGTTTTTATCAATGGGATTGCAACAGAACTTCCAAAGGGACCAATAGACATCAAGACTATGTTTGGAGAAGATGTGATGATAGTTCATTCCTCTGGAGTGCCAATTCTCACCAATGAATTCGGATTCTTGATGCAGAACCTTCAGCATGGAGAAAGCTACTTTCTGGTATCAAAGCCAACATAA 864 0.4745 MEDERQKEAKSPRHGPEKSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMMQQAAATAAVVNQPQSQPQPQLQPQPQPQLQPHGLVGGGAIQHDHHTQVNLVASESTTSNMGLGSCVSYDLLGGSSSSCSGGGGQQGIAGFFSVSSPQMGFPEMIDNNSPAPSVLFPPFDPNLSFQTGYGGTNISAFITVFINGIATELPKGPIDIKTMFGEDVMIVHSSGVPILTNEFGFLMQNLQHGESYFLVSKPT* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00371 287 SMART HOX_1 21 88 IPR001356 GO:0003677
Lapu1g00371 287 MobiDBLite consensus disorder prediction 1 26 - -
Lapu1g00371 287 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Lapu1g00371 287 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Lapu1g00371 287 FunFam WUSCHEL-related homeobox 11 23 90 - -
Lapu1g00371 287 Gene3D - 23 90 - -
Lapu1g00371 287 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 286 IPR044558 GO:0003700|GO:0048830
Lapu1g00371 287 SUPERFAMILY Homeodomain-like 17 90 IPR009057 -
Lapu1g00371 287 MobiDBLite consensus disorder prediction 79 129 - -
Lapu1g00371 287 MobiDBLite consensus disorder prediction 1 25 - -
Lapu1g00371 287 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00371 Lapu-Chr1 13523084 13525251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00371 19 287 Wox Gene Family AT5G17810 44.983 3.99e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu1g00371 Homeodomain 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00371 - - gmx:100791266 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00371 1 13523084 13525251 Lapu1g00371 1 13523084 13525251 ECH