Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00327 ATGGGATCTCACGGTGGGGCAATCCAAGAGCCAAAGAGTGGGTCTTTGACAAGGCAAGGATCTTTATACAATCTCACTCTTGATGAGGTGCACAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTGGATGAGCTGCTCAAGGGTGTGTGGACTGCTGAATCTGGAACTGATGCATACATGCAGCAAGGTCAGGTATCTTCAGCTGGGTCATCTTTGAATGCTCAGGGGAGCCTAACATTGTGTGGAGATCTAAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAACAGAAGAGTGTTAGTCAGGAAAGAGAAAGACAGCCTACACTGGGTGAGATGACCCTGGAGGATTTCTTGGTGAAGGCTGGTTTGACCACTGAGCCTTTCTCTAATGAGGATAGTGCCATGGCCATGTCAGGGGTTGATTCCCAACACAACACATCACAACATGCTCATTGGCTGCAATACCAGCTCACTTCAGTGCAGCAGAAGCCTCAACAACATCATCAGCATCAAAATCAGCAGAATAGCATGATACCGGGTTTCTCGGGTTTCATGGCTGTTCAACAGCCTATGCCGGTTGTGGTGAATCCGGTTCTGGATGCAGGATACTCAGAAGCAATGCCGTCTTCTTTGATGGGTGCCTTATCGGATTCACAAAGTGCAGGTAGGAAAAGGGCTGCCTCAGGTAATGTGGTCGAGAAAACTGTTGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCCGCAGCTCGGTCCCGGGCTAGAAAACAGGCTTACACACACGAACTGGAGATTAAAGTTTCGCGTTTAGAAGAAGAGAATGAAAGGCTTAAAAAACGGAATGAGATAGAGAAGGTATTGCCAAGTGCACCACCACCTGACCCTAAGCATCAGCTTCGCAGAACTAGTTCAGCTCCCCTTTGA 945 0.4741 MGSHGGAIQEPKSGSLTRQGSLYNLTLDEVHNQLGNLGKPLGSMNLDELLKGVWTAESGTDAYMQQGQVSSAGSSLNAQGSLTLCGDLSKKTIDEVWRDMQQKSVSQERERQPTLGEMTLEDFLVKAGLTTEPFSNEDSAMAMSGVDSQHNTSQHAHWLQYQLTSVQQKPQQHHQHQNQQNSMIPGFSGFMAVQQPMPVVVNPVLDAGYSEAMPSSLMGALSDSQSAGRKRAASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTHELEIKVSRLEEENERLKKRNEIEKVLPSAPPPDPKHQLRRTSSAPL* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00327 314 MobiDBLite consensus disorder prediction 225 265 - -
Lapu1g00327 314 SUPERFAMILY Leucine zipper domain 244 289 IPR046347 GO:0003700|GO:0006355
Lapu1g00327 314 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 247 262 IPR004827 GO:0003700|GO:0006355
Lapu1g00327 314 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 313 IPR043452 GO:0003700|GO:0045893
Lapu1g00327 314 Gene3D - 242 294 - -
Lapu1g00327 314 Pfam bZIP transcription factor 244 289 IPR004827 GO:0003700|GO:0006355
Lapu1g00327 314 CDD bZIP_plant_BZIP46 244 289 - -
Lapu1g00327 314 MobiDBLite consensus disorder prediction 164 183 - -
Lapu1g00327 314 Coils Coil 267 294 - -
Lapu1g00327 314 SMART brlzneu 240 312 IPR004827 GO:0003700|GO:0006355
Lapu1g00327 314 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 242 294 - -
Lapu1g00327 314 MobiDBLite consensus disorder prediction 236 265 - -
Lapu1g00327 314 MobiDBLite consensus disorder prediction 286 314 - -
Lapu1g00327 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 242 287 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00327 Lapu-Chr1 12453060 12457838 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00327 1 314 bZIP Transcription Factor Family AT3G56850 57.231 3.26e-107 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu1g00327 bZIP_1 3.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00327 K14432 - gmx:100783666 491.5