Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00317 ATGGAACACCATTTTGGTCAAGACACTGCACCTGCATCTGGGTCCTTTGATAAGACTAGGGTTTTGAATGTGAAGCCATTAAGAACTCTTGTTCCTGTGTTCCCTTCACCATCTAATCCTGCTTCATCTTCCACTCCACAAGGGGGTGCCCCATTTGTCTGTGTTTCTCCTTCTGGTCCTTTCCCTTCTGGGGTTGCACCCTTCTATCCATTCTTCATCTCCCCGGAATCCCAGAAGCTCTCTGAACAGAATGCACAAACCCCCACTACTGGTCAACGTGCACCTGCTGCTCCGATATCTACTGCTGTTCCAATTAATTCATTTAGGACGCCAACTGGAGCTGCAAATGGTGATGTGGGCACATCTAGAAGGAATACCCGAAGTCAGGGACAGGTCACAGAGGAAGATGGCTTCAGTAATGTTGTGATAGATGAAGTTGATGCAGATGCAAGAACTGGGACTGGAAGGTCAAAGCGCAAGTTGCAGAAGAAGATAAAGGGACCAGAGAGTGGTGGTTCTGGCGATGTTGATCCGGATGCTGTGGCTGCTGATATTCTTAAGTCACTTAGCCCATTGGTTTTCGATGTACTAAATCAACCGGAAGGTAGCAGGGACTCTGTTGCATATACACTCATGGTATATGAAATAATGCGAAGAAAGCTTGGACAAATTGAGGATTCAAATAGGGCAAGTAACTCTGGAGCAAAACGACCTGATTTGAAGGCAGGTGCAATTATGATGAATAAAGGGATTCGGACCAACAGCAAGAAACATATTGGACCTGTGTCTGGTGTCGAGATTGGGGATATTTTCTTTTTCAGGTTTGAATTGTGCTTAGTGGGTTTACATGCACCTTCTATGGCTGGAATTGATTACATCGGTACCAAAACCAGTCAAGAGGAAGAGCCCTTAGCTGTAAGTATTGTCTCATCTGGAGGGTATGAAGATGATGTGGAGGATGGGGATGTGCTGATTTATAGTGGCCAAGGTGGGGTTAACCGTGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGATAATAGTGCCCATAGAGGTAACGAAGTGAGGGTAATTAGGGGTTTGAAGGACGTACATCATCCAACTGGTAAGGTATATGTCTATGATGGCCTTTACAAGATTCAAGATTCCTGGGTGGACAAAGCAAAATCTGGTTTCAATGTCTTCAAGTATAAATTAGGCAGGTTGCCTGGACAGCCTCAAGCCTATATGATTTGGAAATCCATTCAACAATGGACTGAGAAATCTGCTTCAAGAGCTGGGGTTATATTGCCTGATCTTACTTCTGGGGCTGAAAAATTACCTGTTTGTCTTGTGAATGATGTTGATGCCGAGAAGGGCCCTGCATATTTCACTTACCTCCCAAATCTCAAGAATTTGAGGCCAACTGCTCCTATGGAATCTTCTATTGGATGTTCTTGTATTGGTGGATGCCAACCTAACAATTTTAACTGTCCTTGTGTTCAAAAGAATGGAGGCTATCTACCTTATTCTTCAGCTTCATTAATTGCGGACCTAAAGTCTGTTATATATGAGTGTGGTCCTTCTTGTCAATGTCCTTCTAATTGCCGAAACCGGGTTTCTCAAGGTGGCTTGAAGTTCCGTTTGGAGGTTTATAAAACCAAGACTAAAGGATGGGCTCTTAGATCATGGGATGCTATTCGAGCAGGATCTTTCATATGTGAGTATGCAGGGGAAGTCATAGACAGTGCCAGAGTGGAGGAGGAGCTTGGTGGTGACAATCTTGATGATTACATTTTTGATTCTACTCGCATTTATCAGCAACTGGAAGTTTTTCCTGGTGACACTGAAGCTCCAAAAATCCCATCCCCCCTATATATATCAGCAATAAATGAAGGGAATGTTGCTCGATTTATGAATCACAGCTGCTCTCCAAATGTATTATGGCGTCCAGTCATACGTGAAAATAAGGATATGTCAGATCTCCACATTGCTTTCTATGCAATTAGACATATCCCTCCTATGATGGAGTTAACTTATGATTATGGGACGGTTCTTCATCTCAAAGCAGGTCATAGGAAAAAGAAATGCTTATGTGGATCTGTGAAATGCAGGGGTTACTTTTGTTAA 2124 0.4331 MEHHFGQDTAPASGSFDKTRVLNVKPLRTLVPVFPSPSNPASSSTPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQKLSEQNAQTPTTGQRAPAAPISTAVPINSFRTPTGAANGDVGTSRRNTRSQGQVTEEDGFSNVVIDEVDADARTGTGRSKRKLQKKIKGPESGGSGDVDPDAVAADILKSLSPLVFDVLNQPEGSRDSVAYTLMVYEIMRRKLGQIEDSNRASNSGAKRPDLKAGAIMMNKGIRTNSKKHIGPVSGVEIGDIFFFRFELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDDVEDGDVLIYSGQGGVNRDKGASDQKLERGNLALDNSAHRGNEVRVIRGLKDVHHPTGKVYVYDGLYKIQDSWVDKAKSGFNVFKYKLGRLPGQPQAYMIWKSIQQWTEKSASRAGVILPDLTSGAEKLPVCLVNDVDAEKGPAYFTYLPNLKNLRPTAPMESSIGCSCIGGCQPNNFNCPCVQKNGGYLPYSSASLIADLKSVIYECGPSCQCPSNCRNRVSQGGLKFRLEVYKTKTKGWALRSWDAIRAGSFICEYAGEVIDSARVEEELGGDNLDDYIFDSTRIYQQLEVFPGDTEAPKIPSPLYISAINEGNVARFMNHSCSPNVLWRPVIRENKDMSDLHIAFYAIRHIPPMMELTYDYGTVLHLKAGHRKKKCLCGSVKCRGYFC* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00317 707 ProSiteProfiles Post-SET domain profile. 691 707 IPR003616 -
Lapu1g00317 707 Gene3D SET domain 428 706 IPR046341 -
Lapu1g00317 707 Gene3D - 242 427 IPR036987 -
Lapu1g00317 707 ProSiteProfiles YDG domain profile. 260 406 IPR003105 -
Lapu1g00317 707 Pfam SAD/SRA domain 258 410 IPR003105 -
Lapu1g00317 707 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 120 699 - -
Lapu1g00317 707 SMART G9a_1 255 410 IPR003105 -
Lapu1g00317 707 MobiDBLite consensus disorder prediction 79 96 - -
Lapu1g00317 707 SMART set_7 545 687 IPR001214 GO:0005515
Lapu1g00317 707 ProSiteProfiles Pre-SET domain profile. 481 542 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu1g00317 707 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 243 425 - -
Lapu1g00317 707 MobiDBLite consensus disorder prediction 103 134 - -
Lapu1g00317 707 Pfam Pre-SET motif 439 537 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu1g00317 707 Pfam SET domain 556 681 IPR001214 GO:0005515
Lapu1g00317 707 MobiDBLite consensus disorder prediction 153 177 - -
Lapu1g00317 707 SUPERFAMILY SET domain 421 687 IPR046341 -
Lapu1g00317 707 SMART preset_2 435 529 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu1g00317 707 MobiDBLite consensus disorder prediction 79 134 - -
Lapu1g00317 707 SUPERFAMILY PUA domain-like 242 425 IPR015947 -
Lapu1g00317 707 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 121 706 IPR025794 GO:0016571
Lapu1g00317 707 ProSiteProfiles SET domain profile. 545 681 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00317 Lapu-Chr1 12182595 12187607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00317 6 706 Su(var)3-9 homologs AT1G73100 47.018 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu1g00317 SAD_SRA 1e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00317 K24405 - gmx:100786650 1261.9