Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00294 ATGGAAGGAGATGGTTATTGTGGGAGTTTTTTTCAGAGGTGCAAGCCTTACATAGCTATGATTTCTCTGCAATTTGGGTTTGCGGGTATGAACATAATCACTAAGGTCTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTCTATAGACATGCCTTTGCTACTGCAGCTATTGCTCCTTTTGCTCTTGTTCTTGAGAGGAAAGTGAGGCCCAAGATTACATTTCTTATGTTCATGCAAATATTCGTGTTGGGTCTACTTGGGCCTGTGATCGATCAGAACTTATACTATGCGGGGTTGAAATTTACTTCCCCTACCTACTCATGTGCAGTAAGCAATATGCTCCCTGCAATGACATTTGTGATGGCTGCTATTTTCAGGATGGAGAAGGTGGACATAAGAAAATTTAGATGCCAAGCAAAAGTGATAGGAACTGTAGTAACAGTTGCTGGGGCCATGTTGATGACATTGTACAAAGGGCAAGTCATCAGTTTCTTGGGTTCTAAGTACATGCATCACCCCAGAAATTATGTGCCTGAAAACACCACTGATTCTGGTGAAAAGGATTGGTTTAAGGGCTCTATTCTTCTCATAATAGCCACCCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAAGTAATCAAGCAGTGACACTAAGGAAATACCCCGCTCAGCTCTCTCTCACAGCACTTGTGTGTGCCTTAGGTACACTGCAGTCAATTGCAGTTACCTTTGTCATGGAGCACAAAACATCTGTTTGGACCATTGGCTGGGATATGAACCTTCTTGCAGCAGCCTATGCTGGAATAATATCATCAGGAATCACCTACTATGTTCAAGGGATTGTCATGCAAAAGAAAGGGCCTGTTTTCGCAACTGCCTTCAGCCCTTTGATGATGATTATCGTAGCCATCATGGGTGCTTTCATCCTTGCAGAAAAAATATATCTTGGAGGGGTCACTGGAGCTATTCTCATAGTAATGGGACTTTACTCGGTTCTGTGGGGAAAATACAAGGAGAACAAGGAGAAAGAGGCAGAGATAACCATTGAGGTGATGAAGTGTTGTTCAGAAAATGGGAGGTTGGAGACTGTGGTAGAAGATGCTGAGACAAACAACGACATTGAGATGCAAAAGGGTGAAGAAGCGTCCAGAGAGTTAAGGGTAGCCATTATTGTTCCAAAAGTTTAA 1194 0.4338 MEGDGYCGSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAVSNMLPAMTFVMAAIFRMEKVDIRKFRCQAKVIGTVVTVAGAMLMTLYKGQVISFLGSKYMHHPRNYVPENTTDSGEKDWFKGSILLIIATLAWASFFILQASNQAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKTSVWTIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFATAFSPLMMIIVAIMGAFILAEKIYLGGVTGAILIVMGLYSVLWGKYKENKEKEAEITIEVMKCCSENGRLETVVEDAETNNDIEMQKGEEASRELRVAIIVPKV* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00294 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Lapu1g00294 397 PANTHER WAT1-RELATED PROTEIN 15 345 IPR030184 GO:0016020|GO:0022857
Lapu1g00294 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 340 - -
Lapu1g00294 397 Pfam EamA-like transporter family 193 335 IPR000620 GO:0016020
Lapu1g00294 397 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00294 Lapu-Chr1 11683798 11686524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00294 1 384 Nodulin-like Gene Family AT5G07050 62.725 4.37e-173 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00294 - - pvu:PHAVU_001G118300g 743.421