Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00292 ATGGAGCTCCTCTCCTTCCTCTTTCTCTTCGTTGCCCTTCTCTTCTCCCTCTATCTCTACTTTGCTACAGAAAAACTACGCCACAACAAAGGCTTCAAACTCTACCCTCTCATCGGAAACTTACCGGAATTTCTCAGAAATCGCCACCGCTTCCTCGAATGGACCACCCAAGTCCTCCACCACTGCCCAACCTACACCGCCGTCTTCTCCCGCCCCTACAGACACCACGGTGTCTTAACGGCAAACCCCGACAACGTGGAACACATGCTCAAAACCCAATTCCAAAACTACCCAAAGGGCGAACGCTTCATCCACCACCTCCAAGACTTCCTCGGCAACGGAATCTTCAACTCCGACGCTGAACTCTGGAAGGTGCAGCGAAAAATCGCTAGCTACGAGTTCAGCACCAAATCACTCCGTAACTTCATTGTCAACTCCGTCACCACCGAACTCCAAACCAGGCTTCTTCCAATTTTCTCCAAAGCCTCCCAGACAAATGGGGTCCTCGATTTGCAGAACCTGTTCGAGTGCTTCGCCTTCGACAACGTCTGCAAGCTAGCCTTCAACATCGACCCCGCCTGTCTCGGCGGTGACAGCACCGCTGGAGCCGAGTTCATGAGGGCGTTCGAGGATGCCGCCAAGCTGACTGCACAGAGGTTCCTGAGCGTGTCACCCCTTTTGTGGAAAATAAAGAAGCTGTTCAACTTTGGATCAGAAGGGAGGCTCAGAAAATCAATCGCGACTGTCCACGAGTTCGCTGACTCCATCATAAGGTCCAGATTTAAAGACAAGGAACTCACCCGCCACGACGAAGACTTACTTTCGCGGTTTATCAGAAGAGAGGAGAGCTCACCGGAGTTTCTTCGTGACGTTGTGATAAGTTTCATTCTCGCCGGACGTGACACGACGTCGTCGGCTCTCACATGGTTCTTCTGGATTCTTTCTTCCAGACCTCACGTAGAGAGAAATATTCGCGACGAAATCGCTAGGGTTCGGTCCGGCATGCGCGGCGTTGGCGCGTTCGGGTACGAGGAGCTAAGGCAGATGCATTACTTGCATGCAGCAATTTCAGAGACGATGAGGTTGTTCCCGCCCGTGCCGATTGACACGAAGATGTGTCTGGACGACGACGTTTTGCCTGATGGAACGAAGGTTGAGAAGGGTTGGTTCTTAACATACCACACCTACGCAATGGGAAGAATGGAGAGCCTGTGGGGCAAAGACAGTACTGAATATAATCCCGAGAGGTGGTTGGAGAACGGGTCGTACCGTACGGAGAGTCCGTTTCGTTTTCCAGTGTTTCACGCGGGTCCTCGAACGTGTCTGGGGAAAGAAATGGCTTATATTCAGATGAAGTCGATCGCAGCTTCATTGATGGAGAAATATGAGATTGAGGTAGTGGATAAGAACACGTGTCCTGAGCATGTTTTGTCTTTAACGTTGAGAATGAAGGGAGGGTTGCCAGTGAGGGTAAGAGTAAGGGACGGCTGGTAA 1494 0.5141 MELLSFLFLFVALLFSLYLYFATEKLRHNKGFKLYPLIGNLPEFLRNRHRFLEWTTQVLHHCPTYTAVFSRPYRHHGVLTANPDNVEHMLKTQFQNYPKGERFIHHLQDFLGNGIFNSDAELWKVQRKIASYEFSTKSLRNFIVNSVTTELQTRLLPIFSKASQTNGVLDLQNLFECFAFDNVCKLAFNIDPACLGGDSTAGAEFMRAFEDAAKLTAQRFLSVSPLLWKIKKLFNFGSEGRLRKSIATVHEFADSIIRSRFKDKELTRHDEDLLSRFIRREESSPEFLRDVVISFILAGRDTTSSALTWFFWILSSRPHVERNIRDEIARVRSGMRGVGAFGYEELRQMHYLHAAISETMRLFPPVPIDTKMCLDDDVLPDGTKVEKGWFLTYHTYAMGRMESLWGKDSTEYNPERWLENGSYRTESPFRFPVFHAGPRTCLGKEMAYIQMKSIAASLMEKYEIEVVDKNTCPEHVLSLTLRMKGGLPVRVRVRDGW* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00292 497 Pfam Cytochrome P450 31 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 Gene3D Cytochrome P450 17 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PANTHER CYTOCHROME P450 19 489 - -
Lapu1g00292 497 SUPERFAMILY Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00292 497 CDD CYP86A 77 487 - -
Lapu1g00292 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00292 Lapu-Chr1 11555668 11557461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00292 31 494 Cytochrome P450 AT3G56630 58.635 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00292 - - pvu:PHAVU_001G118600g 815.839