Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00285 ATGAGGGAAGAGGATTCGAATTGGTTTGCGCGATGGGAAGAGGAACTGCCATCGCCAGAGGAACTCATGCCTCTATCGCAAACCCTAATCACACCCGATCTCGCCATGGCCTTTGACATCAGAAACCCCCACACCACCACCAACCCCAACACCGCGCAACAACACCAACAACAACAACCACCGCAACAGCAACACCAACAACCTTCCAACCCTTCCTCGCTCCCCAACCCCCAGCAACCCACCTCCGCCGAGTTCGCCGACTCCGGCGAGCTCGGCTCCGGTACAGCCGGCGAGGAGCCCGCCCGAACCCTCAAGCGCCCGCGCCTCGTGTGGACCCCACAGCTCCACAAGCGCTTCGTGGACGCCGTCGCGCACCTCGGCATAAAAAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGTTTGACCCGAGAAAACGTCGCCAGCCACTTGCAGAAGTACCGTCTCTATCTCAAACGCATGCAGGGGATTTCCGCCGCCGGACCCGGTGGTCCCGGAGGAGGCGCCTCCGGCGCCGTTGCCGACCCCGCCACTGACCACCTGTTCGCCAGTTCCCCAGTGCCGGCGCATTTCTTGCACCCCGCCACGAGGCCAAATTCGGATCATTTCCTTCCGTTTGTGCCGGTGCCGGCTCTCCACCACCACCAGCAGCAACAGCAGCAGCTGGCCGCGGCGGCGCAGTACCATAGGCAGGTGGGGCATTTCGGATCGCCGCCGAATGGGCACTTCGAGAACCCTTTCATGTCTAGGCCGAATCTTCAGAGGATTGGTGGAGGTGGGGGTGGTCCTGTGCATAACCACCACCCCGTGAGTGGCTATGTCGAGGATATGGAATCTGCTAACGCTGCCTCTGGAGGTAGAAAGGTTCTTACTCTGTTTCCAACTGGAGATGATTGA 927 0.6041 MREEDSNWFARWEEELPSPEELMPLSQTLITPDLAMAFDIRNPHTTTNPNTAQQHQQQQPPQQQHQQPSNPSSLPNPQQPTSAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISAAGPGGPGGGASGAVADPATDHLFASSPVPAHFLHPATRPNSDHFLPFVPVPALHHHQQQQQQLAAAAQYHRQVGHFGSPPNGHFENPFMSRPNLQRIGGGGGGPVHNHHPVSGYVEDMESANAASGGRKVLTLFPTGDD* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00285 308 MobiDBLite consensus disorder prediction 41 88 - -
Lapu1g00285 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 107 159 IPR006447 GO:0003677
Lapu1g00285 308 FunFam Two-component response regulator 102 165 - -
Lapu1g00285 308 MobiDBLite consensus disorder prediction 1 18 - -
Lapu1g00285 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 162 IPR017930 -
Lapu1g00285 308 SUPERFAMILY Homeodomain-like 103 163 IPR009057 -
Lapu1g00285 308 MobiDBLite consensus disorder prediction 1 105 - -
Lapu1g00285 308 Pfam Myb-like DNA-binding domain 110 158 IPR001005 -
Lapu1g00285 308 Gene3D - 103 165 - -
Lapu1g00285 308 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 260 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00285 Lapu-Chr1 11303364 11305485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00285 1 308 G2-like Transcription Factor Family AT3G10760 59.312 1.19e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu1g00285 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00285 - - gmx:100815363 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00285 1 11303364 11305485 Lapu1g00285 1 11303364 11305485 ECH