Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00283 ATGGCGTCAAGAGCAATAGTTCAACAACAAGTCAGAGGTGAAGCAGTAATAGGGGGAGGAAAGCAGCAGAAGAAGAACGGTGCAGCCGATGGAAAGAATCGCAAGGCGTTGGGTGATATTGGGAATTTGGCCAATGAAGTAGGAGTTGAAGTCAAGCCTCATCGCCCCATTACAAGGAGTTTTGGTGCCCAACTACTTGCCAATGCACAAGCAGCAGCAGTTGTTGAGAATAACAAGAAACAAGCTTGTGCTAACGTGGCTGCTCCTGTTCCTGTTGCTGTGGCCAAGAGAGTGGCTGCTCCTGTTCCTGTTGCTGTGGCCAAGAGAGTTCCCAAGCCGGCTCAGAAGAAAGTTAATGTAAAACCAAAGCCTGAAAAAGTCATCGAAATTCAAGATAGTCCAGACAAAGAGGTTCAGAAAGACAAGGACAAGAAAAAGGAAGGAGATGTTAAGTCCAAGAAGGATTCAGTAGCTTTTACATCAACTCTCACTGCAAGAAGCAAGGCTGCAAGTGGCATAACTAACAAACCAAAGGAGAATATTATTGACATAGATGCCAGTGATGTTGACAACGAACTTGCTGCTGTGGAGTATATTGATGACATGTACAAGTTCTATAAACTTGTTGAGCATGAAAGCCGTCCCCGTGACTACATAGACACACAACCTGAGATAAATGAGAGGATGAGAGCTATTCTGGTTGATTGGCTGATAGATGTCCACAGCAAGTTTGAACTTTCACTGGAGACTCTTTACCTGACCATCAATATAATCGATCGATTCCTAGCAGTTAGGACTGTTTCAAGGAGGGAGCTGCAATTGGTTGGTATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCACCTGAGGTTAATGACTTTGTCTGCCTCTCAGATAGGGCTTACACCCATGAACAGATACTTGTTATGGAAAAAGTTATACTGGGAAAATTGGAATGGACTTTGACTGTTCCCACACCTTTTGTTTTCCTGGTGCGTTTTATTAAGGCATCAGTCCCAGATCAAGAGTTGGAAAACATGACCCATTTTCTGTCTGAGTTGGGAATGATGAATTACGCTACCTTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTTTGAATAAGACTCCCCTTTGGAATGAGACACTTAAGCTGCACACGGGTTACTCACAAGAACAACTTATGGATTGTGCTAAACTATTGGCGAGCTTCCACTCCTCTGTTGTGAATGGAAAACTCAAGGTTGTGTACAGGAAGTATTCTGATCCTCAGAAGGGAGCTGTTGCTGTTCTCCCACCAGCTAAATGTCTTCTGTCTGAAGGTTCTGCTTCCCAATAA 1371 0.4413 MASRAIVQQQVRGEAVIGGGKQQKKNGAADGKNRKALGDIGNLANEVGVEVKPHRPITRSFGAQLLANAQAAAVVENNKKQACANVAAPVPVAVAKRVAAPVPVAVAKRVPKPAQKKVNVKPKPEKVIEIQDSPDKEVQKDKDKKKEGDVKSKKDSVAFTSTLTARSKAASGITNKPKENIIDIDASDVDNELAAVEYIDDMYKFYKLVEHESRPRDYIDTQPEINERMRAILVDWLIDVHSKFELSLETLYLTINIIDRFLAVRTVSRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKVILGKLEWTLTVPTPFVFLVRFIKASVPDQELENMTHFLSELGMMNYATLMYCPSMVAASAVFAARCTLNKTPLWNETLKLHTGYSQEQLMDCAKLLASFHSSVVNGKLKVVYRKYSDPQKGAVAVLPPAKCLLSEGSASQ* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00283 456 SUPERFAMILY Cyclin-like 327 446 IPR036915 -
Lapu1g00283 456 PANTHER CYCLINS 146 436 IPR039361 -
Lapu1g00283 456 SMART Cyclin_C_2 328 445 IPR004367 -
Lapu1g00283 456 Pfam Cyclin, N-terminal domain 201 325 IPR006671 -
Lapu1g00283 456 ProSitePatterns Cyclins signature. 230 261 IPR006671 -
Lapu1g00283 456 MobiDBLite consensus disorder prediction 114 153 - -
Lapu1g00283 456 SMART cyclin_7 235 319 IPR013763 -
Lapu1g00283 456 SMART cyclin_7 332 414 IPR013763 -
Lapu1g00283 456 Pfam Cyclin, C-terminal domain 328 444 IPR004367 -
Lapu1g00283 456 CDD CYCLIN_AtCycB-like_rpt1 178 323 - -
Lapu1g00283 456 Gene3D - 215 326 - -
Lapu1g00283 456 MobiDBLite consensus disorder prediction 118 153 - -
Lapu1g00283 456 CDD CYCLIN_AtCycB-like_rpt2 328 444 - -
Lapu1g00283 456 PIRSF Cyclin_A_B_D_E 1 456 IPR046965 GO:0016538|GO:0044772
Lapu1g00283 456 SUPERFAMILY Cyclin-like 190 325 IPR036915 -
Lapu1g00283 456 FunFam G2/mitotic-specific cyclin 214 321 - -
Lapu1g00283 456 Gene3D - 201 440 - -
Lapu1g00283 456 FunFam G2/mitotic-specific cyclin-1 322 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00283 Lapu-Chr1 11270736 11274369 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00283 1 450 Core Cell Cycle Gene Families AT4G37490 51.288 1.79e-146 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00283 K21777 - gmx:547919 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00283 1 11270736 11274369 Lapu1g00283 1 11270736 11274369 ECH