Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00268 ATGGGGCTGTGTCATGGAAAACCCGTTGAAACCTCACAAAGTGAAGGTGGGCACCACGTTTTCCCCGGGGAGAAAGAGGTGGTGGTGGCACCGAGTCCCAAAACCACTACGAAAGGTTCAAAGTTTCCGTTTTACAGCCCAAGCCCGTTGCCGAGTCTGTTCAAGAACTCGCCGGCCAATTCGAGTGTGAGTTCGACCCCTCTCCGGCTCTTCAAGCGGCCCTTTCCGCCTCCGTCGCCGGCGAAGCATATTCGGGCCTTACTGGCCCGTCGCCACGGCTCCGTCAAGCCCAATGAGGCGTCCATCCCGGAAGGGAGTGAGTGTGAGGTTGGGCTCGACAAGAGCTTCGGCTTCTCCAACCACTTCCATGCTCACTATGAGCTTGGTCCTGAAGTGGGCCGTGGCCACTTTGGCTACACTTGCTCTGCCAAAGGAAGAAAAGGCACCTTCAAAGGACATGATGTTGCTGTCAAAGTCATTCCAAAGTCCAAGGTTATTCATGATTGGCCTTTGTGTGGTCTTGCGAAACCTTGCTTTGAGGTGTGGAATAATTTGGTCTTTCTTCTTACGAGAGTGGGGGATGTTTGGCAGATGACAACAGCAATTGCTATAGAAGATGTAAGGAGAGAAGTGAAGATATTGCGAGCTCTGACTGGGCACAAGAATCTGGTGCAATTCTATGAAGCCTATGAAGACAATGATAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGTGAGCTGCTAGATAAGATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAAGATGCCAAAATTGTTATGATTCAGATATTAAGTGTGGTAGCTTTCTGTCATCTGCAGGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTTTATATTTCGAAGGAGGAAGATTCCACTCTGAAGGTCATTGATTTTGGACTCTCTGACTATGTGAAGCCAGAAGCTTTTGCAGATGAAAGGTTGAATGATATTGTTGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCGTATGGGACAGAAGCTGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTCTATGTGGAAGCCGACCCTTTTGGGCAAGGACAGAATCTGGCATATTTCGGGCTGTCCTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCATCTTTATCAGCTGATGCAGTAGATTTTGTAAAGAGACTGTTGAATAAAGATTATCGGAAAAGGCTAACCGCAGCTCAGGCTCTCAGTCATCCATGGCTCACGAGTCAATGTGATGATGTGAAGATACCTTTTGATATGATAATTCACAAGCTTGTTAAAGCTTATATATGCTCATCTTCCTTACGCAAATCGGCATTAGGGGCTCTTGCAAAGACATTAACATTAGTGCAGCTAGCATATCTGAGAGAACAATTCAACATGTTAGGGCCCAATAAAAGTGGGTTAATCTCCATGCAGAACTTCAAGACGGGAATTTTAAGGAGTGTCACCGATGCCTCAAAGGATTCAAGGGTCTTAGATTATGTGAACATGGTTAGTTCAATCCAATATCGCAAACTAGATTTTGAGGAATTTTGTGCTGCTGCTATTAGTGTCCATCAACTAGAGGGAATGGAGAGCTGGGAGCAACATGCAAGGCGTGCCTACGAGTTGTTTGAAAAGGAAGGAAATAGACCAATTATGATTGAAGAGCTTGCCTCGGAACTTGGGCTTAGCCCTTCAGTACCAATTCATGTGGTACTCCAAGATTGGATAAGACACTCAGATGGGAAGCTTAGCTTCTTGGGGTTTGTTAGGCTCCTGCATGGGGTTTCTTCTCGCACATTTCAGAAGGCTTGA 1854 0.4563 MGLCHGKPVETSQSEGGHHVFPGEKEVVVAPSPKTTTKGSKFPFYSPSPLPSLFKNSPANSSVSSTPLRLFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVGLDKSFGFSNHFHAHYELGPEVGRGHFGYTCSAKGRKGTFKGHDVAVKVIPKSKVIHDWPLCGLAKPCFEVWNNLVFLLTRVGDVWQMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDNDNVYIVMELCKGGELLDKILSRGGKYSEEDAKIVMIQILSVVAFCHLQGVVHRDLKPENFLYISKEEDSTLKVIDFGLSDYVKPEAFADERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEAPWPSLSADAVDFVKRLLNKDYRKRLTAAQALSHPWLTSQCDDVKIPFDMIIHKLVKAYICSSSLRKSALGALAKTLTLVQLAYLREQFNMLGPNKSGLISMQNFKTGILRSVTDASKDSRVLDYVNMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKEGNRPIMIEELASELGLSPSVPIHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTFQKA* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00268 617 SMART serkin_6 126 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00268 617 FunFam Calcium-dependent protein kinase SK5 335 430 - -
Lapu1g00268 617 Pfam Protein kinase domain 205 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00268 617 Gene3D Transferase(Phosphotransferase) domain 1 249 443 - -
Lapu1g00268 617 Gene3D - 446 535 - -
Lapu1g00268 617 ProSitePatterns Protein kinases ATP-binding region signature. 132 158 IPR017441 GO:0005524
Lapu1g00268 617 ProSiteProfiles Protein kinase domain profile. 126 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00268 617 Gene3D - 451 605 - -
Lapu1g00268 617 SUPERFAMILY EF-hand 455 608 IPR011992 -
Lapu1g00268 617 FunFam CDPK-related kinase 1 437 609 - -
Lapu1g00268 617 CDD STKc_CAMK 125 424 - -
Lapu1g00268 617 SUPERFAMILY Protein kinase-like (PK-like) 121 439 IPR011009 -
Lapu1g00268 617 MobiDBLite consensus disorder prediction 1 42 - -
Lapu1g00268 617 FunFam CDPK-related kinase 1 199 247 - -
Lapu1g00268 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
Lapu1g00268 617 PANTHER SERINE/THREONINE-PROTEIN KINASE 112 593 - -
Lapu1g00268 617 Gene3D Phosphorylase Kinase; domain 1 128 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00268 Lapu-Chr1 10548916 10554979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00268 1 615 EF-hand Containing Proteins AT3G50530 63.473 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu1g00268 Pkinase 1.9e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00268 - - gmx:100803625 1066.99