LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu1g00252	ATGGCCAATAAGGAGAATAACGAAAGAAACACCCATTTTGTCATAGATCATTTCAATGAGAATGTTAACGAAGAGCATAATACAGAAGTTGATGAATACAGGAGTGATAATAGTAATCATTGCGACAGTGACCATGAAGGAAATCATAGATCTTCTTTCATTTCTCAACAATGGCCTCAAAGTTATAGAGATGCCACTGATTCTTACTCAATTTCTGTTGCTCCAAATATTGGATCAATTATACGAGCACCAAGCGTTATTTACTCAAGTTTTATTGGAGCTGGATCAAAGAGTTACTTAGAACAAGATGAAAGGACTTCTTTTTTGTCTGGTGAGGAGCTCTCGCAAGCAGGGATAACAAGAAGACAATCAACATGGTGGGAGAAAGCTTCAATTCAAATGCAAATTGATGAAGAATTACCCATTGATTATGGATGTAGCCTTAGTCAAACAATATTTAATGATCTTATGAAACAATGCTTTGAAAGTAAAGAAGGAATCATTAGCTACCCTGATATAGGAGAAGCCGCGTTTGGAAGATATGGTCGACTTATTATATCAACATATTGTGTGGAGTTTATCATCTTGGAAGGAGATAACCTCACTGGGTTGTTTCCTGGAACATCCTTACACTTTGGGAGCTTCCACTTGAACTCCAAACACTTGTTTGGAATTTTAACTGCACTTATTATTCTCCCCACTGTTTGGTTAAAGGATCTACGCATAATCTCCTATCTTTCAGCTGGAGGAGTTATGGCTACTACTTTGATTATTTTGTGTGTGTTTCTTGTTGGAACAAGAGATGATGTTGGATTCCACCAGAGTGGTCCATTCCTAAAATGGAGTGGCATGCCTTTTGCTTTTGGTATCTATGGATTTTGCTTTGCAGGACATTCAGTTTTTCCAAACATTTATCAGTCGATGGCTGATAAAAGAGAATTTACTAAGGCAGTGGTTATAAGTTTTATTCTATGCATATTTGTATATGGAACCTCAGCAGTCATGGGATTTCAAATGTTTGGCGAAGGGACTTTGTCTCAAATAACATTGAATTTACCACGAAATTCATTAGCTTCAAAAGTTGCATTGTGGACAACAAACAGTGTTGGTTATGTCTACAGTTTGTGCAGCTTTTCTGATTCCATTTTTTGGGCTTGTGATGGCTTTAATTGGCTCTCTCCTAAGTGTACTAGTGTGGTGTTGCCATCTTTATGCTTTTTGAAAATTGTGGGAAAACATGCAACAACTACACAGGTTGCTCTTAGCGTCACCATTGCTGCCTGTGGAATCATTAGTGCTTTGATTGGAACATATTCGTCTGTATCCAAAATCATGCAAACTAACCACAATCACTGA	1356	0.3746	MANKENNERNTHFVIDHFNENVNEEHNTEVDEYRSDNSNHCDSDHEGNHRSSFISQQWPQSYRDATDSYSISVAPNIGSIIRAPSVIYSSFIGAGSKSYLEQDERTSFLSGEELSQAGITRRQSTWWEKASIQMQIDEELPIDYGCSLSQTIFNDLMKQCFESKEGIISYPDIGEAAFGRYGRLIISTYCVEFIILEGDNLTGLFPGTSLHFGSFHLNSKHLFGILTALIILPTVWLKDLRIISYLSAGGVMATTLIILCVFLVGTRDDVGFHQSGPFLKWSGMPFAFGIYGFCFAGHSVFPNIYQSMADKREFTKAVVISFILCIFVYGTSAVMGFQMFGEGTLSQITLNLPRNSLASKVALWTTNSVGYVYSLCSFSDSIFWACDGFNWLSPKCTSVVLPSLCFLKIVGKHATTTQVALSVTIAACGIISALIGTYSSVSKIMQTNHNH*	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu1g00252	451	PANTHER	OS05G0424000 PROTEIN-RELATED	156	439	-	-
	Lapu1g00252	451	MobiDBLite	consensus disorder prediction	1	49	-	-
	Lapu1g00252	451	Pfam	Transmembrane amino acid transporter protein	159	358	IPR013057	-
	Lapu1g00252	451	MobiDBLite	consensus disorder prediction	1	56	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu1g00252	Lapu-Chr1	10121024	10127056	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu1g00252	25	366	Amino Acid or Auxin Permease AAAP Family	AT2G41190	50.639	4.45e-123	366

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu1g00252	K15015		-	gmx:100790344	477.633

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu1g00252	1	10121024	10127056	Lapu1g00252	1	10121024	10127056	ECH