Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00237 ATGGGGATGGCTGCAGAGTCACAGTTTCATGTGTTGGCTGTTGATGACAGCATCATAGATAGGAAACTCATTGAGAGGCTCCTCAGAACCTCTTCCTACCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGCGTGAGAATGATAAGACCAACCCAAGTACACCAACTGTTTCTCCCAACAACAATCATCAGGAGGTGGAGGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTGGTGATTATGTCATCCGAGAATGTGCCTTCAAGGATTAGCAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTGAGGCTGTCGGATTTGAACAAGCTTAAACCCCACATGAAGAAGACCAAGTTGAAAGATCAAAAGCAAGGAACAGCAGAAAAACTAGAAAACTCAGAAGTTCTACAGCAACAGGCACAACAAATCCTCCAAAATGACCAGCAACAACCACCAAAACCCCAAGATCCTCAACCGGAGTCAGAGTCACATCCACAACCAACTATAGAACAACAGCAACAATCACTACAACAAGCCAACAATAACAAGAGGAAGACCATGGAACAGGGACTTTCACCTGAGACTGACAGAACAAGACCCAGATACAGTGGCATAGCCACTGTGGTATGA 726 0.438 MGMAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDKTNPSTPTVSPNNNHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKLKDQKQGTAEKLENSEVLQQQAQQILQNDQQQPPKPQDPQPESESHPQPTIEQQQQSLQQANNNKRKTMEQGLSPETDRTRPRYSGIATVV* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00237 241 MobiDBLite consensus disorder prediction 194 220 - -
Lapu1g00237 241 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 206 IPR045279 GO:0009736
Lapu1g00237 241 SUPERFAMILY CheY-like 8 141 IPR011006 -
Lapu1g00237 241 MobiDBLite consensus disorder prediction 161 183 - -
Lapu1g00237 241 Pfam Response regulator receiver domain 11 141 IPR001789 GO:0000160
Lapu1g00237 241 Coils Coil 201 221 - -
Lapu1g00237 241 CDD REC_typeA_ARR 11 142 - -
Lapu1g00237 241 Gene3D - 10 231 - -
Lapu1g00237 241 SMART REC_2 9 143 IPR001789 GO:0000160
Lapu1g00237 241 MobiDBLite consensus disorder prediction 145 241 - -
Lapu1g00237 241 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00237 Lapu-Chr1 9676726 9679191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00237 1 241 Response Regulator Gene Family AT3G57040 61.024 1.13e-99 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu1g00237 Response_reg 1.5e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00237 K14492 - gmx:100814494 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00237 1 9676726 9679191 Lapu1g00237 1 9676726 9679191 ECH