Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00233 ATGTCAGAATCAAACGCAATTGCAAATGGATTGGCTGGTGCAGGAGGTGGAATCATTGCTCAAATCTTGACTTATCCTCTTCAAACGGTACTCTCTCTCTCTCTCTCTGCTTCTCTCTTTGGCTATGTTACCAATTCCCTTCCAATTTTTCAGGTAAACACGCGCCAGCAAACTGAGAGAACACTCAAGAGGAACAAGCAAAGTTTGCCCTCCAACACAACCACTTCTCCTTGCACTCTTCTTCAGATCTTTCAGGTCATCAGAACTGAGGGTTGGGGTGGACTCTTCAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTATTTCTATCAAGTTTTCAAGAACAAGGCAGTGGCAATTGCAGCTGCACGGAAAGCGAAAGGGCATGGAGATGGTACTGTTGGGATGTTTGGTTGGCTTGTTGTGGCTGCAATTGCTGGGTCCTTGAATGTGTTGCTGACATGTCCAATATGGGTTTTAGTGACTCGGATGCAGACTCATACTCAAGCAGAAAGGAAGATTATGGAGGAAAAGAAAGAAGCTTTAAGGAAGGCTGCTTCTGAAAGCACCATAGCAGACTCCACATTGCAAGATAAATTGGATGAACTGAATTCTATAAAACCTCAACCATATGGAACTTTACATGCTGCTAATGAAGTCTACAATGAAGCGGGTACAGTAGGATTTTGGAAGGGTGTCATCCCTTCCCTTATTATGGTATGCAATCCATCAATTCAATTTATGATTTATGAAAGCTCATTAAAGCATCTAAGGGCAAAACGTGCAGCTAAAAGGCAAGGGAATACAAGTGTATCTGCTTTGGAGGTCTTTTTGGTGGGAGCAATAGCTAAACTTGGAGCCACTGTGACAACATATCCATTACTAGTTGTGAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAGTAACTCATTAAGATACTCAGGTACATTTGATGCTGTACTTAAAATGATCCGTTATGAAGGAATACCTGGCTTCTATAAGGGGATGAGCACAAAGATAGTGCAGAGTGTTTTTGCAGCTTCTGTTCTGTTCATGGTCAAAGAGGAGCTTGTTAAGGCTTTCATAGTTCTATCCGCGAAGAGCAAAAAAGTTGCATTAAATTTGAGTAGCTGA 1161 0.4246 MSESNAIANGLAGAGGGIIAQILTYPLQTVLSLSLSASLFGYVTNSLPIFQVNTRQQTERTLKRNKQSLPSNTTTSPCTLLQIFQVIRTEGWGGLFSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKAKGHGDGTVGMFGWLVVAAIAGSLNVLLTCPIWVLVTRMQTHTQAERKIMEEKKEALRKAASESTIADSTLQDKLDELNSIKPQPYGTLHAANEVYNEAGTVGFWKGVIPSLIMVCNPSIQFMIYESSLKHLRAKRAAKRQGNTSVSALEVFLVGAIAKLGATVTTYPLLVVKSRLQAKQEIGGSNSLRYSGTFDAVLKMIRYEGIPGFYKGMSTKIVQSVFAASVLFMVKEELVKAFIVLSAKSKKVALNLSS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00233 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 123 IPR018108 -
Lapu1g00233 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 278 369 IPR018108 -
Lapu1g00233 386 Gene3D Mitochondrial carrier domain 129 372 IPR023395 -
Lapu1g00233 386 Gene3D Mitochondrial carrier domain 1 128 IPR023395 -
Lapu1g00233 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 141 263 IPR018108 -
Lapu1g00233 386 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 373 IPR044712 GO:0006862|GO:0055085
Lapu1g00233 386 Pfam Mitochondrial carrier protein 4 122 IPR018108 -
Lapu1g00233 386 Pfam Mitochondrial carrier protein 278 370 IPR018108 -
Lapu1g00233 386 Pfam Mitochondrial carrier protein 141 265 IPR018108 -
Lapu1g00233 386 SUPERFAMILY Mitochondrial carrier 42 365 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00233 Lapu-Chr1 9433880 9439788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00233 85 370 Chloroplast and Mitochondria Gene Families AT1G25380 26.370 6.43e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00233 K13354 - gmx:100775304 600.127