Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00231 ATGGTTGCTTTGTTCTCTCCTCCTGTGTTCTCAACCAAGGGGTGGCTCTTAGAGGAGGAGCCATTAGGCTATAATAATAGCCAGAACTGCTTCTACAAAGATGATGTGTCCTCAGAGTACTCGTTTCCCTATCAATTTTATTCACCACAGACACAGATTGAGGTTGACATAGAAAGGTCCACTGCACCATCTCCTGACCCTGCCATGGTCAAGAAACTTAGCCACAATGCTAGTGAACGTGATCGCCGCAAGAAGGTCAACAACTTGGTTTCCTCACTTCGGTCACTTCTTCCACTGGCAGATCAAACGAAAAAAATGAGCATTCCGGCAACAGTTTCTAGAGTGTTGAAATACATACCTGAACTGCAACTGCAAGTGCAAGCACTAACAAAGAGAAAAGAGGAGCTTCTATGCAGAATTTCTAGGCAATTGCAAGGAGATGCAGTGAACAAAGAATCTCATAGGAAAATTTCCCATCACAACTCTTCTTTTGTTGTCTCAACAAGTAGGCTCAACGATTGTGAAGCTGTAGTTCACATTTCCTCTCATGAGACCCAGAGGGCTCCACTATCCGAGATCTTGCACTGTTTAGAAAGTGATGGCCTTTTTCTGCTAGATGCTTCTTCCTCAGAAACCTTTGAAGGAAGGTTCTTCTACAATTTACATTTTCAGGTGGAAAAAACTGATAGATTAGAGTCCGAGATTCTAACTGAGAAGCTTTTACCAATATATGAGAAGAAAAGGATTTTCTAA 753 0.421 MVALFSPPVFSTKGWLLEEEPLGYNNSQNCFYKDDVSSEYSFPYQFYSPQTQIEVDIERSTAPSPDPAMVKKLSHNASERDRRKKVNNLVSSLRSLLPLADQTKKMSIPATVSRVLKYIPELQLQVQALTKRKEELLCRISRQLQGDAVNKESHRKISHHNSSFVVSTSRLNDCEAVVHISSHETQRAPLSEILHCLESDGLFLLDASSSETFEGRFFYNLHFQVEKTDRLESEILTEKLLPIYEKKRIF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00231 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
Lapu1g00231 250 Coils Coil 119 139 - -
Lapu1g00231 250 SMART finulus 76 128 IPR011598 GO:0046983
Lapu1g00231 250 MobiDBLite consensus disorder prediction 60 84 - -
Lapu1g00231 250 FunFam Transcription factor ORG2 66 151 - -
Lapu1g00231 250 Gene3D - 66 160 IPR036638 GO:0046983
Lapu1g00231 250 CDD bHLH_AtORG2_like 71 144 - -
Lapu1g00231 250 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 239 - -
Lapu1g00231 250 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
Lapu1g00231 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 141 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00231 66 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 49.180 1.77e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu1g00231 HLH 1.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00231 - - gmx:100803424 400.593