Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00187 ATGGCGATGGTATGGGAAGATCTAACAGTTGAGCAACCTGCAAGATTTGGAGAACAGAAGAAGAAGTTGCTTAATGGAATCACTGGTTTTGCTGAACCTGCTAGGATTATGGCCATCATGGGTCCTTCTGGCTGCGGCAAAACCACCTTCCTTCACTCTTTCACTGGAAAACTTGCTCCAAATGTTGTAGTGACAGGGAACATTCTAATCAAAGGGAAGAAGAAAAGTTTGAATTCCAGAGATGTGTCCTATGTAGCTCAAGAGGAACTTTTCTTGGGAACTTTGACTGTAAAAGAGACCCTCACATTCTCTGCAAACATGAGGCTTCCTTCCAAAATGACCAAAGAAGAGATAAACAAAGTGGTCGAAGAAACCATAATGGAAATGGGTCTGGAAGATTGTGCGGATACAAGGATTGGGAATTGGCATTGTAGGGGTATTAGTAATGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAGATTTTAACACAACCCCATGTTTTACTTCTTGATGAACCTACTACTGGCCTTGATAGTGCCTCAGCTTTCTATGTGATTCAAGCTCTATGCCACATTGCTCACAAAGGAAAGATAGTTATCTGTTCCATTCACCAACCCAGCAGTGAGATTTTTTATCTATTTGATGATTTGCTTTTGCTCTCGAGTGGGGACTCTGTTTATTTTGGACAAGCAAAGAAGGCTCTAAAGTTTTTTGCTGATGCAGGGTTACCCTGTCCTGCTAGAAGAAATCCTTCAGATCATTTTCTTCTGTGTATCAATTTGGACTTTGACTTGATTGCTTCAGCTCTAGAAACAGCTCTGTTAGGTTTGCACTCTTCATCAAATTCAGCACTGGGAATGAGAAAAGCCGAGATTAGAGAGACACTCATTCAGAGTTATAAAAATTCAGTGTTAACTATCACTACAAGAAGAATTCAACAATTGAAATCTAATGTAACAGAACAGCAAGAAATCAAGACAAATATAGGTGGTAGTAGTAGTAGTACTGCATGGTGGAAGCAATGGTGCGCCTTGACTGAGCGAACTTTCCTAAACATGACTAGAGACATTGGTTACTACTGGCTAAGGACGATATTCTACATACTGGTAGCAATCAGTGTTTGCACCCTCTTTTTTCGTATTGGCACGGACAAAGACTCAATCTTGGCTAGAGGAAAGTGTATATCATTTATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTGAAGGTGTTCTATGGTGAAAGATCCAAAGGGCATTATGGAGAGGCTGCATTTGTAGTATCAAACATCATATCATCATTCCCTTTCCTTGTTCTAATATCACTCTCCTCCGGTACAATTATTCACTTCATGGTGCAATTTCATCCGGGATTAACTAATTCTGCATTTTTCTGTATGAACTTATTCTGCTGCCTATCTATTGTTGAGTGCTGCATCATGATTGTTGCCTCACTGGTCCCCAATGTGCTGATGGGCATAGGAATAGGAACTGGTGTAATTATCTTCATGATGATGCCCTCCCAAATATCAAGACCATTACCTGACATTCCAAAGATCTTTTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTCTTTGGGCAGTGCAGGGACAGTACAAGAATGACATGCTGGGGTTGGAATTTGATCCTTTGGTGCCAGGAAACCCCAGACTTAGTGGAGAACAAGTCCTGGAGTTGGTACTTGGGGTTCCATTGGATCATAACAAATGGTGGGACTTAACAGCACTGGTTGCCTTATTAGTAGTTCACAGATTGGTTCTTTACTTGGTGCTTTGCTATGTCACCCGATCTAATTCACCAAAGTTGTGGTTTTGTGCCAAGAAAATTCTACACTTTGCACAAAAATGTTTATTCAGTAAGAAGCCATCAACTTCCTCCAGGAAACAAGCTCACCATCCATTATCGTCACAAGAGGGTCTTATGTCCCCAAACTTTGCAATGTAA 1992 0.4086 MAMVWEDLTVEQPARFGEQKKKLLNGITGFAEPARIMAIMGPSGCGKTTFLHSFTGKLAPNVVVTGNILIKGKKKSLNSRDVSYVAQEELFLGTLTVKETLTFSANMRLPSKMTKEEINKVVEETIMEMGLEDCADTRIGNWHCRGISNGEKKRLSIGLEILTQPHVLLLDEPTTGLDSASAFYVIQALCHIAHKGKIVICSIHQPSSEIFYLFDDLLLLSSGDSVYFGQAKKALKFFADAGLPCPARRNPSDHFLLCINLDFDLIASALETALLGLHSSSNSALGMRKAEIRETLIQSYKNSVLTITTRRIQQLKSNVTEQQEIKTNIGGSSSSTAWWKQWCALTERTFLNMTRDIGYYWLRTIFYILVAISVCTLFFRIGTDKDSILARGKCISFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAAFVVSNIISSFPFLVLISLSSGTIIHFMVQFHPGLTNSAFFCMNLFCCLSIVECCIMIVASLVPNVLMGIGIGTGVIIFMMMPSQISRPLPDIPKIFWRYPMSYLSFALWAVQGQYKNDMLGLEFDPLVPGNPRLSGEQVLELVLGVPLDHNKWWDLTALVALLVVHRLVLYLVLCYVTRSNSPKLWFCAKKILHFAQKCLFSKKPSTSSRKQAHHPLSSQEGLMSPNFAM* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00187 663 Gene3D - 9 254 IPR027417 -
Lapu1g00187 663 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 8 247 IPR003439 GO:0005524
Lapu1g00187 663 MobiDBLite consensus disorder prediction 639 663 - -
Lapu1g00187 663 Pfam ABC transporter 31 174 IPR003439 GO:0005524
Lapu1g00187 663 Pfam ABC-2 type transporter 204 256 IPR043926 GO:0140359
Lapu1g00187 663 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 3 628 - -
Lapu1g00187 663 SMART AAA_5 33 224 IPR003593 GO:0016887
Lapu1g00187 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 238 IPR027417 -
Lapu1g00187 663 Pfam ABC-2 type transporter 341 546 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00187 Lapu-Chr1 7987865 7991247 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00187 31 216 Calmodulin-binding Proteins AT2G36910 26.396 1.44e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00187 K05681 - gmx:100802207 1066.22