Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00186 ATGGGATTGAAGGTGCTTACACAGATGCAAGTGACCCTGCTGCTGCTGCTGATTGCGTTAACAATAACAGGAACTGCAACAGATGACCTAGCCCTGCCCGGCTGCCCGCACAAGTGCGGAAATGTTTCAATTCCGTACCCCTTTGGCGTTGGCGTGTCAACTGTCACGGGAGAGAACTGTTTCATGGAGAAAGACTTGAAACTCAACTGCACAGACTCCACTCTATACGCAGGTAACGTCGAAATTCTGAACATAACCCTCCAAGGTCAAATGGAGATGAATTTCTTCGTCTCCAGTATCTGCAAAATCAACATTTTTAACGGAAAAACAGAAGCCAACGAACCCACACTCAAAACTGCATCCTTCACCATTTCCAGCAAGGACAACAAGTTCGTGAGTATAGGGTGCGACACGTACGGGTATCTCAACAGTTTCGTCAACAATGGGACATACTCAACAGGGTGCCTGACAAGATGTGACAAGAATGAAGAGAGCTTGAAAAACATGCAGAGAAGTGATGGGGACTGTGCGGGCGTAGGGTGCTGCCAGGTGGATATTCCTCCTGGAATGAAGAACATCAGTATACAAGCATACTCCTTTAATCATTTCGTAAACTCTTCCAATCCCAACAGCTGCAGCGTTTCGTTCGTGGTGAAAAATGACAAGTACAAATTCTCGCTGGATCATTTGAAGCACATCCCATTCCATAAGGCTCCCATGGTGGTTGATTGGACTGTTGGAGATGGTGCATGTAGCACCATCTCAGACCCCTGCGCCAGACCTTACAGCTATTGCGAGGACCCTCCCTCTGCCAATGGAACTGGTTACCTATGCAAATGTAAACCAGGTTTTGAGGGCAACGCTTATCTTCCCCACGGTTGTACAGACGTTTTGGAATGTAAAACTGACAATCACACTTGTGCAAAGCGAGAGTACTGTCATGAAATGCCTGGTTCTTTTAACTGTTCATGTCCTGATAAACAAATCGGAAATGCAACACGTGGAGGTGAAGGTTGCCACCCAAAGGAGCGAGCTGATATATTTACCAAGATTGTCATTGGTACAGGAGTAGGGTTAATTGCTCTATTTGTGGGGGTTTCTTGGCTATACTTGATGCACCAGAAAAGGAGAGTCTTGAAACTAAAGGAGAGGTTCTTTCAGCAGAATGGGGGCTTTATACTAAGACAACAACTCTCTACAAGAGGAGACTTATCCGCTAGAATTTTTAATGTTGAGCAACTTAAGAAAGCCACCAACAATTTTGATGAGAGTTTAATCATCGGTAAAGGAGGTTATGGAACAGTTTTCAAAGGGGTTCTCTCAAATAACCAAGTTGTGGCTATCAAAAAGTCCAAAATAGTGGATAAGAGCCAGGTGGAGCAATTCATTAATGAGGATGTATGTTGGAAAACGCGTCTAAGGATTGCCACAGAGGCAGCTGCAGCTTTGCAATATCTACACTCGGCAGCAAACCCACCCATCATCCACAGAGATGTGAAAACTGCCAACATACTCTTAGATGACAATAACACTGCGAAAGTGTCTGACTTTGGAGCTTCACGATTGGTTGCACTTGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGCTATTTAGACCCAGAGTACATGCAATCAGGCCAATTGACTGAAAAAAGTGATGTCTATAGCTTTGGGGTAGTGCTTGTAGAGCTGCTAACAGGAGAGGAACCTTTCTCTTTTCATAAGGCAGAAGAGGAACGAAGTCTTACTGTTCACTTTCTATGTAGCTTGAAAGAGGATCATCTTTTTGATATTCTTCAGGATGGTATTGCAGATGAAGAAAATAAGCAGGAGATTATGGAAGTTGCTACTCTTGCTGCCAGGTGCTTGAGGCTTACAGGGGAGGAAAGGCCTAGTATGAAGGAAGTGGCCATGGAATTGGAGGGAATAAGACTTATGGACAAACACCCTTGGGTGAATACAAGCCAAGATTTTGAGGTGAATCAATACTTGCTTTCTGAGATAAAAAGAACTTGTGAACATGGTGACAGTAGTGGCCAGCAAAATATTGGATATGATAGTTTGAGAGAACTTGAATTACATAACTTTGGTAATGGAAGATGA 2112 0.4384 MGLKVLTQMQVTLLLLLIALTITGTATDDLALPGCPHKCGNVSIPYPFGVGVSTVTGENCFMEKDLKLNCTDSTLYAGNVEILNITLQGQMEMNFFVSSICKINIFNGKTEANEPTLKTASFTISSKDNKFVSIGCDTYGYLNSFVNNGTYSTGCLTRCDKNEESLKNMQRSDGDCAGVGCCQVDIPPGMKNISIQAYSFNHFVNSSNPNSCSVSFVVKNDKYKFSLDHLKHIPFHKAPMVVDWTVGDGACSTISDPCARPYSYCEDPPSANGTGYLCKCKPGFEGNAYLPHGCTDVLECKTDNHTCAKREYCHEMPGSFNCSCPDKQIGNATRGGEGCHPKERADIFTKIVIGTGVGLIALFVGVSWLYLMHQKRRVLKLKERFFQQNGGFILRQQLSTRGDLSARIFNVEQLKKATNNFDESLIIGKGGYGTVFKGVLSNNQVVAIKKSKIVDKSQVEQFINEDVCWKTRLRIATEAAAALQYLHSAANPPIIHRDVKTANILLDDNNTAKVSDFGASRLVALDQTEIATIVQGTFGYLDPEYMQSGQLTEKSDVYSFGVVLVELLTGEEPFSFHKAEEERSLTVHFLCSLKEDHLFDILQDGIADEENKQEIMEVATLAARCLRLTGEERPSMKEVAMELEGIRLMDKHPWVNTSQDFEVNQYLLSEIKRTCEHGDSSGQQNIGYDSLRELELHNFGNGR* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00186 703 Pfam Protein kinase domain 474 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00186 703 ProSiteProfiles Protein kinase domain profile. 349 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00186 703 Gene3D Laminin 249 336 - -
Lapu1g00186 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Lapu1g00186 703 FunFam Wall-associated receptor kinase 2 449 666 - -
Lapu1g00186 703 Pfam Wall-associated receptor kinase galacturonan-binding 35 90 IPR025287 GO:0030247
Lapu1g00186 703 Gene3D Transferase(Phosphotransferase) domain 1 463 658 - -
Lapu1g00186 703 SUPERFAMILY Protein kinase-like (PK-like) 407 658 IPR011009 -
Lapu1g00186 703 ProSitePatterns Protein kinases ATP-binding region signature. 427 450 IPR017441 GO:0005524
Lapu1g00186 703 Gene3D Transferase(Phosphotransferase) domain 1 404 462 - -
Lapu1g00186 703 SMART serkin_6 421 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00186 703 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 469 656 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00186 Lapu-Chr1 7921848 7925327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00186 35 703 Receptor kinase-like Gene Family AT1G21230 38.525 4.18e-155 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lapu1g00186 Pkinase 1.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00186 - - gmx:100819535 896.345