Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00182 ATGGAGTTGCAGACTAAGGCAGGTGTTGCAGTGGAGAATAAGAGAAGAGTGTGTTTGGTTTGGGAAGATTTAACAGTGGTGGCCTCAAACGGTAGCAGTAGTGCAGAAAGGGAACTGCTAAAAGGGTTAACTGGTTATGCAGAACCCAATCGGATTATGGCACTGATTGGTCCTTCAGGATCTGGGAAATCAACTTTGCTTGCTGCACTCGCTGGGATACTTCCAACCAATGTTAGGATGACGGGAAATGTATTACTCAATGGGACAACCAGAACCACGACTGGCTGCAAAGATGTTTCTTATGTTACTCAAGAAGATCATTTCTTAGGAACTCTAACAGTGAAGGAAACCCTCACATATGCAGCTCGTTTGAGACTTCCTGCTGATATGACCAGAAATGAGATTGACAAGGTGGTAACCAATGTATTGGCTGAAATGGGTCTGGAAGATAGTGCAGAAAGCAGACTTGGGAATTGGCATTTGAGAGGCATAAGTACTGGAGAGAAAAGAAGGCTTAGCATAGGCATTGAGATCTTAACTCAACCTCATGTAATGTTTCTGGATGAACCCACTAGTGGCTTGGATAGTGCAGCCTCTTTCTATGTGATTTCTTCTCTATCAAACATAGCACATGATGGAAGAATAGTTATATGCTCCATTCACCAGCCAAGTGGTGAAGTCTTCAACCTTTTCGATGATCTGGTCCTCCTTGCAGGAGGTGAAGCTGTATACTTTGGACAAGCAACTATGGCTGTAAAGTTCTTTGCTGATGCAGGGTTCCCTTGTCCAACCCGAAAGAATCCTCCTGAGCATTTCCTTCGTTGTGTTAGCCCAGAGTTCGATAGTGTTACAGCCTTAATACAGTCTAAAATTGAAAATGTCGCCTCATCTTCGTGGAATTCTCTAATGAATATGACGACAGAGGAAATTAAATCTGAACTGGTAATGAAGTACAAGAACTCCATACATTCAGCAAATGCACGGAGAAAGGTCAGAGAAATGACAAAAGTTTTGCAGGAAGAACCTTTAGTTGGGAAGAAATATGATACCAGCTGGCTGAAGCAGCTATGCACATTGACAAATAGATCATTCCTAAATATGACCAGAGACTTTGGTTACTATTGGTTAAGGATTGTATTCTATATCATGATATCAGTGAGTGCTGGTTGTATTCTTTTCAACATAGGAACAAGTAATGAAGCAATCATATCTAGAGGCAAATGTGATGGATTCATCTTTGGCTTAATGATCTTTCTGTGTTTAGGCGGGGTACCCTTTTATCATGAGGAATTAAAGGTCTTCAAACGTGAAAGGTTCGGAAAGCATTATGGGGAGGCCATCTTTGTACTCTCACATTTCCTCTCGTCATTTCCCTTTGTTCTTGCAATTTCCATCTCTTCAGGAACAATACTTTACCATTTGGTGAACTTTCATCCAGGCTTCTCTCACTACTGCTATTTTTGCATGAATATATTTTGCTTCATTTCTGTCACAGAGGGCTGCACATTATTCGTTGCAGCACTTGCACCCGACCTATTGGTAGCAATTGGAACTACAACTGGTGTAATTGTGTTCCTGATGGTGCCATCTAATGTATTCAGAAGTCTAGCAGACCTTCCAAAATTCTTTTGGCGCTATCCAATGTCCTATCTCAGCTACATTACATGGTCAATACAGGGTCAATTCAAGAATGACCTGATAGGTCTTGAATTTGAACCACAGGTGGCTGGGGATACCAAGATAAAGGGTGAACATATACTTCATGTCATGTTTGGAATTAGGACTGATTATTCAAAATGGTGGGACTTAGGAGTTGTAGTTTGCTTCTTGATATGCTATAGAGTGCTGTATTACTTGGTTCTTAAACACAAGGAGAGAGCTTCATCATTATTGCACATCAAAAGGACCCTCCAAAACATTTTCCTCAAAAGACCCTCTTTGAAGGACAAGTATACTTCTTCCAAGCGGCATCAACCCTTGCATCCTTTGTCAGTTCAGGAGGGTCTTTACTCTCCAATGTCATAA 2025 0.4128 MELQTKAGVAVENKRRVCLVWEDLTVVASNGSSSAERELLKGLTGYAEPNRIMALIGPSGSGKSTLLAALAGILPTNVRMTGNVLLNGTTRTTTGCKDVSYVTQEDHFLGTLTVKETLTYAARLRLPADMTRNEIDKVVTNVLAEMGLEDSAESRLGNWHLRGISTGEKRRLSIGIEILTQPHVMFLDEPTSGLDSAASFYVISSLSNIAHDGRIVICSIHQPSGEVFNLFDDLVLLAGGEAVYFGQATMAVKFFADAGFPCPTRKNPPEHFLRCVSPEFDSVTALIQSKIENVASSSWNSLMNMTTEEIKSELVMKYKNSIHSANARRKVREMTKVLQEEPLVGKKYDTSWLKQLCTLTNRSFLNMTRDFGYYWLRIVFYIMISVSAGCILFNIGTSNEAIISRGKCDGFIFGLMIFLCLGGVPFYHEELKVFKRERFGKHYGEAIFVLSHFLSSFPFVLAISISSGTILYHLVNFHPGFSHYCYFCMNIFCFISVTEGCTLFVAALAPDLLVAIGTTTGVIVFLMVPSNVFRSLADLPKFFWRYPMSYLSYITWSIQGQFKNDLIGLEFEPQVAGDTKIKGEHILHVMFGIRTDYSKWWDLGVVVCFLICYRVLYYLVLKHKERASSLLHIKRTLQNIFLKRPSLKDKYTSSKRHQPLHPLSVQEGLYSPMS* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00182 674 Gene3D - 9 257 IPR027417 -
Lapu1g00182 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 19 264 IPR003439 GO:0005524
Lapu1g00182 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 13 633 - -
Lapu1g00182 674 SMART AAA_5 49 249 IPR003593 GO:0016887
Lapu1g00182 674 Pfam ABC-2 type transporter 221 281 IPR043926 GO:0140359
Lapu1g00182 674 CDD ABCG_EPDR 16 246 - -
Lapu1g00182 674 Pfam ABC-2 type transporter 355 560 IPR013525 GO:0016020|GO:0140359
Lapu1g00182 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 249 IPR027417 -
Lapu1g00182 674 Pfam ABC transporter 41 192 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00182 Lapu-Chr1 7747028 7757399 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00182 38 233 Calmodulin-binding Proteins AT2G36910 26.794 1.29e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00182 - K05681 aip:107646291 937.947