Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00180 ATGGGAGCTGCGTGGAGGCAGTTGAAGGTCATGCTCCGCAAGAACTGCCTCCTCAAAATTCGTCATCCCTTCGTCACTGCCGCCGAGATTTTGCTCCCTACGATTGTGTTGTTGCTGTTAGTAGCTATAAGGACGAAAGAGGATACACAAATTCATCCTGCTCAACCGCACATTCAAAAAAATATGTTTGTGGAAGTGGGCAAAGGGATATCTCCCAACTTTCAACAAGTTTTGCAATCGTTGTTGGATAGGGGAGAGTATTTAGCTTTTGCACCAGATACAGATGAGACGAAGCTGATGATAGACATAGCGTCAATAAAATTTCCACTCTTGAAGCTTGTTAGTAGAATATACAAAGATGAGGTAGAGTTGGAAACCTACATACGCTCTGATGCTTATGGTACCTGCAATCAAGCAAGGAATTGTTCTAATCCCAAAATTAAAGGAGCAGTTGTGTTTTATGAACAAGGCCCTCATTCCTTCGATTATAGCATACGCCTCAATCATACATGGGCTTTCTCTGGTTTTCCTGATGTTACAACAATAATGGATACAAATGGCCCTTTTCTTAATGACTTGGAACTTGGTGTTAGTGCTGTACCAACAATGCAATACAGCTTCAGTGGGTTTTTGACTCTCCAGCAAATGGTTGATTCATTCATAATATTAATAGCGCAGCAGTCTGACTTAAATTTCAATGCTGAAAGTCTGGACCTTCCTCTTCCAGGCTTCCATGACACTAATTTTTCTTTGAAAAACCCATGGACTCAGTTTAGTCCTGCACACATACGAATAGCACCATTTCCCACTCGAGAGTATACCGATGACCAGTTCCAGTCAATCATAAAGAAAGTCATGGGAATATTGTACTTGTTGGGATTTCTCTATCCAATTTCTCGCCTAATCAGTTATTCTGTGTTTGAGAAGGAACAGAAGATTAAAGAAGGACTGTATATGATGGGCCTGAAAGATGGTATATTTCATCTTTCTTGGTTCATCACATATGCAATGCAGTTTGCAATTTCTTCTGGAATCCTTACAGCTTGCACCATGTATAATTTATTCAAGTACAGTGATAAGACACTGGTGTTTGCGTACTTTTTTGTTTTTGGGCTAAGTGCAATCATGCTCTCATTCTTTATATCAACATTTTTCAACCGGGCTAAAACAGCTGTTGCTGTTGGCACTCTATCCTTTCTTGGAGCCTTTTTCCCATATTACACAGTAAATGATGAGGGAGTTTCAATAATCTTGAAGGTTATTGCTTCTTTACTTTCACCTACTGCCTTTGCTTTGGGTTCAATCAACTTTGCTGATTACGAGCGTGCACATGTTGGACTTCGTTGGAGCAACATATGGAGGGAATCTTCAGGAGTGAACTTTCTTGCATGCCTTTTGATGATGATACTTGATACGCTGCTATATTGTGTGATTGGACTTTATTTTGACAAGGTTCTTCCAAGGGAGTATGGAAGGAGATACACATGGAGCTTTATTTTCCAAAAGGACTTTTGGAGGAAGAAAAACGTTGTAAAACATAGTTCCTCCGGTTCTGAAGTTAAAATATCTGGTAAGAATTCTGAGTCAGAAGGGAATATTTCAGGGGAGTATACTTCCAGACCTGCCATTGAAGCAATAAGCGTAGACATGAAACAACAGGAGCTTGATAGCAGGTGCATTCAAATCAGGAATTTACATAAAGTGTATGCTACAGAGAAAGGAGATTGCTGTGCTGTTAACTCATTACAGCTGACTCTGTATGAAAACCAGCTTCTTGCCCTCCTAGGACATAATGGAGCTGGAAAAAGCACTACAATCTCAATGCTTGTTGGTCTACTTCCTCCTACTTCTGGGGATGCTTTGGTTTTTGGAAAGAATATTGTATCAGATATTGATGAGATACGGAAGGTTTTGGGTGTCTGCCCACAACATGATATACTCTTTCCTGAATTAACAGTTAGAGAGCATTTAGAACTATTTGCCATATTAAAGGGAGTGGAGGAACACTTGTTGGACAATGCTGTTATTAATATGGCTGATGAGGTGGGCCTGGCTGACAAAATCAACAGTATTGTGAGAACTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCATTGATTGGAAACAGTAAGGTTATAGTCCTTGATGAACCTACTAGTGGAATGGATCCATACTCTATGCGCTTGACTTGGCAGTTGATAAAAAAAATTAAGAAGGGCAGGATAATTTTGCTAACTACACATTCTATGGATGAAGCAGATGAACTGGGTGACCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGTTGTGGAAGTTCCCTTTTCTTGAAGCATCATTATGGAGTTGGTTATACTCTAACTCTTGTGAAGTCAGCTCCCACTGCTTCTATTGCTAGTGATATAGTATACCGTCATGTACCATCAGCAACATGTGTAAGCGAGGTTGGAACTGAGATTTCTTTCAGGCTTCCAATGGCATCCTCATCAGCCTTCGAGAGGATGTTTAGGGAAATTGAAGGTTGCATGAAAAAACCAGTTTCGAACATGGAATTGACTAGCAATGGTGAAAAAGACAATCTTGGTATTGAAAACTATGGTATATCTGTAACAACCCTGGAGGAGGTATTTTTAAGAGTTGCTGGATGTGATGAAGATGAAGTTGAATGCTTTGAAGAAAATAACCATTCTCTTGTATCGGACTGTGTGGTTTCACTTCCTTCTAATGATCATCCTTCCACTAAAATAAGCTGTCTTAAATTTTTTGGAAACTATAAGAAGATTCCGGGTTTCATGTCTACCATGTTGGGAAGTGCTTGTCGCTTAATTTTTGCTACACTTTTTAGTTTTATGAACTTCTTGGGGATGCAGTGCTGTAGTTGTTGTCTCATTACTAGGTCAACATTTTGGCTACATTTTAAAGCCTTATTCATTAAAAGGGCAATATCTGCTCGGAGAGATCACAAAACAATTGTTTTCCAGCTAATGATTCCTACACTCTTCCTGTTTGTTGGTCTTCTATTTCTTAAGCTCACGCCACATCCGGATCAGCAATCACTGACCCTTTCAACTTCTCACTTTAATCCTCTATTGAGTGGTGGGGGTGGGGGAGGTCCAATTCCATTTAATCTGTCTTTGCCAATTGCTGAAAAGGTAGCACTAAATGTTATAGGAGGTTGGATTCAGAGGTTCAAGTCAAGCTCGTACAGATTCCCTAATTCAGAAAAGGCATTGGCTGATGCAGTGGAAGTGGCAGGGCCAACTCTCGGACCTTCTCTACTTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAATCTTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAAAGTAATGATGGAAGCTTAGGATACACTGTATTACACAACGGTTCCTGTCAACATGCTGCTCCCACATTTATCAATTTGGTGAATTCTGCTATTCTTAGGCTTGCAACTCAAGACACAAATATGACAATTCGGACACGCAACCACCCTCTACCAACTACACGAAGCCAGCGCTTACAACGTCATGACCTGGATGCCTTCTCTGCTGCAGTTATTGTCAACATTGCTTTCTCTTTTATACCTGCGTCATTTGCTGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCAGCAACAACTAATCAGTGGGGTTTCTGTCCTGTCATATTGGGCTTCTACATATATTTGGGACTTTGTGAGCTTCTTGTTTCCGGCCTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTCTGGAACAGTTTGTTGGAGGGGTTTCTTTGTTACCAACAATCCTCATGCTATTGGAATATGGACTTGCAATTGCATCATCAACCTATTGCCTTACATTTTTCTTTTTTGATCACACCATGGCTCAGAATGTGGTTCTGCTGATCCACTTTTTCACTGGTTTGATACTAATGGTTATCTCATTCATTATGGGACTCATGACATCAACAATGAGTACCAATTCTTTTCTTAAGAATTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCATTAGCTCTTTTGCGGCAAGGAATGAAAGATAAAACAAGTGATGGGGTGTTTGATTGGAATGTTACGGGAGCTTCCATCTGTTATCTTGCTGTTGAGAGCTTTAGTTATTTTCTGTTGACACTTGCACTTGAAATTTTACCTTCTGTCAAATTGACTACATTCATGATCAAAAAGTGGTGGGAAAAACTTAATATCTTCGTGCGTGATAGTCCTCATTCGGAACCTCTGTTAGAACCTTCTTCCGAAACTGTTTTTATGGACTTCGATGAAGATGTAGATGTAAAAACAGAAAGAAATAGAGTACTTTCAGGTTCCATTGACAATTCCATTATCTACCTGCGCAATCTTCGCAAGGTATATTTTGAGGAGAAGCATCATGGAAGAAAGGTTGCAGTAGATTCTTTAACTTTCTCAGTCCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGCTATGCGGGGAAGAATCTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCCATCCAAAGGCTGCCCGTCAATATATTGGATATTGTCCACAATTTGATGCTCTATTGGAATACTTAACTGTTCAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTTTGCAATAGAAAATGTTGTTACGGAAAAGTTGGCCGAGTTTGACTTGTTGAAGTATGCCAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGAAAACTGTCTGTTGCAATTGCAATGGTTGGTGATCCACCTATAGTTATTCTTGATGAACCATCCACAGGTATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGGATCTCAACAAGGCGAGGAAAAACTGCAGTAATTCTGACTACACACAGCATGAATGAAGCCCAAGCCTTGTGTACCAGAATAGGGATAATGGTTGGTGGACAATTACGATGCATTGGAAGTCCACAGCATCTAAAAACAAGATTTGGGAATCATCTGGAACTGGAGGTCAAACCTACGGAAGTGAGTTCCGCGGACTTGCAAACCCTCTGCCAAGCTATTCAAGAAAGACTTCTTGATATCCCATCTCATCCTAGAAGCTTACTTAATGACCTTGAAATTTGCATTGGGGGCACTGACTCTGTCACATCAGGAAATACCTCCATTGCAGAGATTAGCTTGACACGAGAAATGATAAGCTTAATTGGGCACTGGCTTGGCAATGAAGAAAGAGTAAAGACATTAATCTCTTGTTCGCCTGTCTGTGATGGAGCTTCTCAGGAACAATTATCAGAACAACTGTTTCGAGGTGGGGGAATTCCATTGCCAGTATTTTCTGAGTGGTGGCTGTCTAAACAAAAATTCTCAGAAATTGATTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGTCAAGGGTGCAATGGTTTGAGCATCAGATATCAGTTACCATATAATGAGGATTTTTCCTTGGCAGATGTTTTTGGACTTCTTGAAAGAAATAGGAATACATTAGGGATTGCGGAGTACAGCATCAGCCAATCAACTCTAGAGACAATATTTAATCATTTTGCAGCTAATCCATGA 5679 0.3992 MGAAWRQLKVMLRKNCLLKIRHPFVTAAEILLPTIVLLLLVAIRTKEDTQIHPAQPHIQKNMFVEVGKGISPNFQQVLQSLLDRGEYLAFAPDTDETKLMIDIASIKFPLLKLVSRIYKDEVELETYIRSDAYGTCNQARNCSNPKIKGAVVFYEQGPHSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAVPTMQYSFSGFLTLQQMVDSFIILIAQQSDLNFNAESLDLPLPGFHDTNFSLKNPWTQFSPAHIRIAPFPTREYTDDQFQSIIKKVMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYAMQFAISSGILTACTMYNLFKYSDKTLVFAYFFVFGLSAIMLSFFISTFFNRAKTAVAVGTLSFLGAFFPYYTVNDEGVSIILKVIASLLSPTAFALGSINFADYERAHVGLRWSNIWRESSGVNFLACLLMMILDTLLYCVIGLYFDKVLPREYGRRYTWSFIFQKDFWRKKNVVKHSSSGSEVKISGKNSESEGNISGEYTSRPAIEAISVDMKQQELDSRCIQIRNLHKVYATEKGDCCAVNSLQLTLYENQLLALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFAILKGVEEHLLDNAVINMADEVGLADKINSIVRTLSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIASDIVYRHVPSATCVSEVGTEISFRLPMASSSAFERMFREIEGCMKKPVSNMELTSNGEKDNLGIENYGISVTTLEEVFLRVAGCDEDEVECFEENNHSLVSDCVVSLPSNDHPSTKISCLKFFGNYKKIPGFMSTMLGSACRLIFATLFSFMNFLGMQCCSCCLITRSTFWLHFKALFIKRAISARRDHKTIVFQLMIPTLFLFVGLLFLKLTPHPDQQSLTLSTSHFNPLLSGGGGGGPIPFNLSLPIAEKVALNVIGGWIQRFKSSSYRFPNSEKALADAVEVAGPTLGPSLLSMSEYLMSSFNESYQSRYGAIVMDDQSNDGSLGYTVLHNGSCQHAAPTFINLVNSAILRLATQDTNMTIRTRNHPLPTTRSQRLQRHDLDAFSAAVIVNIAFSFIPASFAVSIVKEREVKAKQQQLISGVSVLSYWASTYIWDFVSFLFPASFAIVLFYIFGLEQFVGGVSLLPTILMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLIHFFTGLILMVISFIMGLMTSTMSTNSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTGASICYLAVESFSYFLLTLALEILPSVKLTTFMIKKWWEKLNIFVRDSPHSEPLLEPSSETVFMDFDEDVDVKTERNRVLSGSIDNSIIYLRNLRKVYFEEKHHGRKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARQYIGYCPQFDALLEYLTVQEHLELYARIKGVPDFAIENVVTEKLAEFDLLKYANKPSFSLSGGNKRKLSVAIAMVGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNHLELEVKPTEVSSADLQTLCQAIQERLLDIPSHPRSLLNDLEICIGGTDSVTSGNTSIAEISLTREMISLIGHWLGNEERVKTLISCSPVCDGASQEQLSEQLFRGGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGCNGLSIRYQLPYNEDFSLADVFGLLERNRNTLGIAEYSISQSTLETIFNHFAANP* 1893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00180 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Lapu1g00180 1892 CDD ABC_subfamily_A 1464 1690 - -
Lapu1g00180 1892 Gene3D - 1456 1706 IPR027417 -
Lapu1g00180 1892 Gene3D - 546 796 IPR027417 -
Lapu1g00180 1892 FunFam ABC transporter A family member 1 1453 1707 - -
Lapu1g00180 1892 Pfam ABC transporter 1486 1628 IPR003439 GO:0005524
Lapu1g00180 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 556 798 IPR027417 -
Lapu1g00180 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1463 1693 IPR027417 -
Lapu1g00180 1892 FunFam ATP-binding cassette sub-family A member 12 552 797 - -
Lapu1g00180 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 987 1400 IPR026082 GO:0016020|GO:0055085|GO:0140359
Lapu1g00180 1892 CDD ABC_subfamily_A 560 781 - -
Lapu1g00180 1892 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524|GO:0016887
Lapu1g00180 1892 ProSitePatterns ABC transporters family signature. 1601 1615 IPR017871 GO:0005524|GO:0016887
Lapu1g00180 1892 SMART AAA_5 1494 1680 IPR003593 GO:0016887
Lapu1g00180 1892 SMART AAA_5 588 770 IPR003593 GO:0016887
Lapu1g00180 1892 Pfam ABC-2 family transporter protein 993 1394 IPR013525 GO:0016020|GO:0140359
Lapu1g00180 1892 Pfam ABC-2 family transporter protein 211 481 IPR013525 GO:0016020|GO:0140359
Lapu1g00180 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1464 1702 IPR003439 GO:0005524
Lapu1g00180 1892 Pfam ABC transporter 580 723 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00180 Lapu-Chr1 7667975 7721055 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00180 554 837 Calmodulin-binding Proteins AT2G36910 25.338 7.28e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00180 K05643 - gmx:100803263 3491.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00180 1 7667975 7721055 Lapu1g00180 1 7667975 7721055 ECH