Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00170 ATGACTTATTCCCATGTTGATGCTTCTGGGGTGATTGGAAGGGAGAGCGATAGGGAAGAAATTATCAAGCTTTTGATGCAACCTCACCCTCATGGTGACGGTTATGGAGATAAAAGTGTTTGTGTTATTCCCATTGTGGGTATTGGAGGGTTGGGGAAGACTACACTGGCAAAGTTGGTGTTCAATGATGAGAGAATGGGTGATCTATTCCAGTTGAAGATATGGGTGTGTATCTCTGATGACTTTGACATAAGGCAGATAATTATTAAAATCATCAACTCCGCTTCTGCTTCAGATCCAACGATTGCTCTTGCTCACCAAGAAAACATTAACAGCTTAGACATTGAGCAGCTACAAAATCGTCTTAGAGTAAAGCTTTCTGGTCAGAAGTACTTACTCGTGTTGGATGATGTATGGAATGATGATCGTGCGAAATGGATAGAGTTGAAAGATTTAATAAAAGTTGGTGCGGTGGGAAGCAAAATCGTAGTAACAACACGAAGTAACTCAATTGCTTCGATGATGGGCACTGTTCCATCGTATGTTTTAGAAGGTCTTTCTATGGAGAATTGTTTTTCTCTCTTTGTCAAATGGGCATTTAAGGAAGGCGAAGGAAAAAACTATCCAAATCTAATGGCGATTGGGAAAGAAATTGTGAAAAAATGTCGAGGGGTTCCACTAGCAGTGAGAACTTTAGGAAGTTCCCTGTTCTTGATTTTTGATTTAGAGAGGTGGGAATTCGTAAGAGAGCATGAAATATGGAACATAAGACAAAAGAAAGATGACATTTTACCTGCTCTTAAGTTGAGCTATGACCAAATGCCTTCCTATTTAAGGCATGTTTTTGCTTTCTTTTCTCTTTATCCTAAAGATTATGTTTTCTGGAGTGTTGAAACTGTTATTCTTTGGGAGTCACTTGGATTACTTCCACCTCCTGTTGGAAATCAAAAGCTTGAGAACATTGCAAGGCAATACATTGATGAGTTACATTCGAGATCATTTCTTGAGGATTTTGAGGACTTTGGCCACCTTTACTTTTTCAAAGTACATGATTTGGTACATGATCTTGCGCTGTATGTCGCAAAAGAAGAGATTCTTGCGGTAAACTCAGGTACCCGGAATATACCTGAGCAAATACGGCATTTATCAGTTGTTGATAATGATTCACTTAACCGTGTTTTGTTCCCCAAGTCTAGCAGTGTGAGAACTATATTATTTCCGACAGATGGAGTTGGTGTTGACAGTGCAGCTCTTTTGGATGCATGGATAACAAGATTCAAATTCTTGCGTATTTTAGATTTAAGCGATTCCACTTTTGAGACCCTTCCCAATTCAATTGGTAAACTGGTGCATTTGCGAGCTCTCAGTCTTGAAAATAACCGAAAAATAAAAAGACTTCCTCATTCTATATGCAAACTCCAAAATTTGGAAGTTTTGTGTTTAAGAGCATGTGTGAAGCTTGAAACATTGCCTAAAGGATTTGGGATGTTAATCAGCCTTCGAAATTTGTTTATCACCACAAAACAGTCTATTCTGTCAGAGGATGAATTTGCAAGCTTGATTAATCTCCGTACTTTGAATTTTGAATTTTGTGATAATTTGATGTTTCTGTTCCGAAGGGCACAACTCATATCCCTTGAAGTTTTGGTAGTTCAATCATGTAGGAGGCTAGAGTCCCTTCCTTTTCATATTCTCCCTAAACTGGAGGTTCTGTTTGTCATCAGGTGTAAGATGCTAAATCTGTCCTTGAACTGTGAAAACCCGATCCACACATTAAGGATGAAGTTTCTGTATGCTGACCAATGTCCAAAGCAACAGACATTGCCTCAATGGATTCAAGGGGCTTCAAACACTTTGCAGACATTGATAATTTCAAATTGGCATAGTCTTGAGATGCTTCCTGAGTGGCTTACAACAATGACTCATCTTAAGATGCTTCATATTGTTAACTGTCCTCGGCTGTTGTACCTCCCGAGTGAGATGCATCGCCTCGTTGCCCTTCAAGATTTAAGCATAGATGGTTGTTCTGAATTGTGTCGAAAATGTGAGCCACAATCTGGTGAGTATTGGTCCTTCATTGCTCACATCGAACACCTTTCCATTGGAGAAACAAGAGAAGGACAACTTTTTTTCCAAATGCGCAAGCGTTATCTACTGAGATTTGAGGATTTGTAG 2175 0.3922 MTYSHVDASGVIGRESDREEIIKLLMQPHPHGDGYGDKSVCVIPIVGIGGLGKTTLAKLVFNDERMGDLFQLKIWVCISDDFDIRQIIIKIINSASASDPTIALAHQENINSLDIEQLQNRLRVKLSGQKYLLVLDDVWNDDRAKWIELKDLIKVGAVGSKIVVTTRSNSIASMMGTVPSYVLEGLSMENCFSLFVKWAFKEGEGKNYPNLMAIGKEIVKKCRGVPLAVRTLGSSLFLIFDLERWEFVREHEIWNIRQKKDDILPALKLSYDQMPSYLRHVFAFFSLYPKDYVFWSVETVILWESLGLLPPPVGNQKLENIARQYIDELHSRSFLEDFEDFGHLYFFKVHDLVHDLALYVAKEEILAVNSGTRNIPEQIRHLSVVDNDSLNRVLFPKSSSVRTILFPTDGVGVDSAALLDAWITRFKFLRILDLSDSTFETLPNSIGKLVHLRALSLENNRKIKRLPHSICKLQNLEVLCLRACVKLETLPKGFGMLISLRNLFITTKQSILSEDEFASLINLRTLNFEFCDNLMFLFRRAQLISLEVLVVQSCRRLESLPFHILPKLEVLFVIRCKMLNLSLNCENPIHTLRMKFLYADQCPKQQTLPQWIQGASNTLQTLIISNWHSLEMLPEWLTTMTHLKMLHIVNCPRLLYLPSEMHRLVALQDLSIDGCSELCRKCEPQSGEYWSFIAHIEHLSIGETREGQLFFQMRKRYLLRFEDL* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00170 724 Gene3D - 185 269 IPR042197 -
Lapu1g00170 724 Gene3D - 5 180 IPR027417 -
Lapu1g00170 724 PRINTS Disease resistance protein signature 125 139 - -
Lapu1g00170 724 PRINTS Disease resistance protein signature 222 236 - -
Lapu1g00170 724 PRINTS Disease resistance protein signature 42 57 - -
Lapu1g00170 724 PRINTS Disease resistance protein signature 471 487 - -
Lapu1g00170 724 Pfam NB-ARC domain 38 272 IPR002182 GO:0043531
Lapu1g00170 724 Gene3D - 270 359 IPR036388 -
Lapu1g00170 724 SUPERFAMILY L domain-like 348 705 - -
Lapu1g00170 724 Gene3D Ribonuclease Inhibitor 366 714 IPR032675 -
Lapu1g00170 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 284 IPR027417 -
Lapu1g00170 724 PANTHER DISEASE RESISTANCE PROTEIN RP 18 574 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00170 Lapu-Chr1 7450133 7452307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00170 43 678 WRKY Transcription Factor Family AT5G45050 23.112 7.95e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00170 - - gmx:100794422 1095.49