Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00166 ATGACCGAATCATTTCTCTTCAGCATCGCAGAGTCACTCGTAGCAAAGCTTGCTTCTCGTGCTTTTGAAGAAGCTTCTCGAGTGGTGGGTTTATACGACAATCTTCGAGACCTTACAAAGACTCTCTCTTTAGTCAAGGCTGTGCTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATGAGCTCCGGGAATGGCTGACTCAGCTCAAAACTGTCTTCTCCGATGCCGAAGATGTTTTGGATGAATTTGAGTGCCAAACACTTCGAAAGAAAGTGGTCAAAGCTCATGGTAGCACCAGAGACAAGGTAAGTCATTTCTTCTCAAGCTCTAATCCACTTGTTTTTCGTTACAAAATGGCTCAACAAATTAAAGATCTCGGCAACAGACTAGACAAGGTTGCAGCTGACAGGCATAAGTTTAGTCTTCAAATAATTGATGTTGACACACGCATTGTCCATCGGAGAGATATGACACACTCCCGTGTGAGTGATTCAGATGTGGTAGGAAGGAAACATGATAAAGAAAAGATCATAGACCTTTTGATGCAGCAGAATCCTAATAATGACGATGCAAGTTTGTCTGTTATACCCTTTGTTGGGATTGGAGGCTTGGGAAAGACTACACTTGCAAAGTTTGTGTTCAATGACAACAGGATCCAGGAGTGTTTTCCATTGAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATTAAACAACTGATTATCAAACTCCTTCATTCTGCCAATGATCCAGATTCTGTTGATGCTCCTTCTCACCCACAGAATTGGAACATGTTGGATCTGGAGCAACTGCAAAATCAACTGAAAAACAAACTTTCCGGTAAAAAATTCTTACTCGTCTTGGACGATGTATGGAACGAAGACCGTGTTAAATGGGTTGACCTGAGGAATTTAATCCAACTAAGTGCTGCAGGAAGCAAAATTGTAGTAACCACACGTAGTCATTCAATTGCTTCCATGATGGGCACAGTTCCCTCTCACATTTTAGAAGGTCTTTCACAGAGAGATTCAATGTCTCTGTTTGTCAAATGGGCATTTAAAGAAGGAGAAGAGGAAAAACATCCTCACTTAGTCAGTATTGAGAGAGAAATTGTGAAAAAATGTAGAGGGGTCCCTTTGGCAGTGAGAACATTAGGGAGTTTACTATTCTCGAAATTTGAGGCCAGGGAATGGGAATATGTGAGAGACAATGAAATTTGGAATTTGCCACAGAAAAAAGATGACATTTTACCCGCCCTTAAATTAAGTTATGATCTCATGCCGTCCTATTTGAGGCAATGTTTTGCCTTGTTTTCCCTTTATCCAAAGGATTATGTATACATTAATATTGAGATAAATTCGCTTTGGAGGGCACTTGGACTCATTGCATTACCAAAAAAGAATAGGACACTTGACGATGTGGCCAACCAATATATGCTTGAACTTCTGTCAAGATCTTTTCTTCAAGATTTTCAAAGCTTTGACACTCTTTATACATTTAGAATACATGATTTGGTGCATGATCTCGCTCTATTTGTTGCAAAGGATGAGTGTGTACATGTAACTTCCAATAATCAAAATATTCCAGATAATGTTCGGCATCTGTCTTTCGCTGAGAGCAGTTTGTTTGGCAATTTAGAGACCAAAAAATCAGCAGCTGTGAGAACCGTACTGTTTCCAAATGGTGCAGCAGCTGCCAACGATCAAGCTTTACTAAATACGTGTCTGTCAAAGTTCAAATGCTTGCGAGTTTTGGATTTACGTGGTTCGACATTCGAGTGTTTGCCCCATACAATTGCTAAGTTGAAACATTTGAGATATTTGGACATTAGCGAAAGTCTCAACATTAAGAGACTCCCCGAGTCTATTTGCAAGCTCCAAAGTTTGCAACTGTTGAGGCTTGAGGAATGCATGGAGCTGGAAGCATTGCCCAAAAGATTAAGAAAATTGATCAATCTCCGTTGTTTGGAGTTTAGCATAAAACAAACTGTTTTTCCTGTCAATGAGATTGGCAACTTGGGCTCGCTTGAAATCTTGACTGTTAAATCATGCCATAATGTGGAGTCCATCTTTGGAGGGATGAAATTCCCTGCTCTTAAAACATTGTGCGTTTGGGACTGTCAGAGTCTAAAGTCTTTGCAGCTGGATGGTGAAAATTTTCCTGAATTAGAAAGTTTGATTGTTGATGGCTGTGGTAATTTGGACTTGGAACTGTGTAAGGGCCCCAGTGAAGAACAAAGCCCCAATCTCACGTTAAAATTTCTTGCATTTTCAACTTTATCACAGCTGGTGGCTTTTCCTAAATGGGTTCAAGAAGCAGCCAACTTTTTACAGAGCTTGCTTATTTCAAATTGCCACAACATTGAAAAGCTTCCAGATTGGTTAACAACTCTGACTGATCTGAAAACACTTGAAATAACAGATTGTCCAAAGTTAGAATCTCTCCCAGATAATATCGATCACCTCACCGCGCTTGAAAGCTTGAGGATTAAAGGTTGTCCTGACTTATGTAAAAAATATCAGCCCCATGTTGGAGAGTTTTGGCTCAAAATATCACACATCAAAAACATTGTCATTGAT 2580 0.4008 MTESFLFSIAESLVAKLASRAFEEASRVVGLYDNLRDLTKTLSLVKAVLLDAQQKQEHNHELREWLTQLKTVFSDAEDVLDEFECQTLRKKVVKAHGSTRDKVSHFFSSSNPLVFRYKMAQQIKDLGNRLDKVAADRHKFSLQIIDVDTRIVHRRDMTHSRVSDSDVVGRKHDKEKIIDLLMQQNPNNDDASLSVIPFVGIGGLGKTTLAKFVFNDNRIQECFPLKMWVCVSDDFDIKQLIIKLLHSANDPDSVDAPSHPQNWNMLDLEQLQNQLKNKLSGKKFLLVLDDVWNEDRVKWVDLRNLIQLSAAGSKIVVTTRSHSIASMMGTVPSHILEGLSQRDSMSLFVKWAFKEGEEEKHPHLVSIEREIVKKCRGVPLAVRTLGSLLFSKFEAREWEYVRDNEIWNLPQKKDDILPALKLSYDLMPSYLRQCFALFSLYPKDYVYINIEINSLWRALGLIALPKKNRTLDDVANQYMLELLSRSFLQDFQSFDTLYTFRIHDLVHDLALFVAKDECVHVTSNNQNIPDNVRHLSFAESSLFGNLETKKSAAVRTVLFPNGAAAANDQALLNTCLSKFKCLRVLDLRGSTFECLPHTIAKLKHLRYLDISESLNIKRLPESICKLQSLQLLRLEECMELEALPKRLRKLINLRCLEFSIKQTVFPVNEIGNLGSLEILTVKSCHNVESIFGGMKFPALKTLCVWDCQSLKSLQLDGENFPELESLIVDGCGNLDLELCKGPSEEQSPNLTLKFLAFSTLSQLVAFPKWVQEAANFLQSLLISNCHNIEKLPDWLTTLTDLKTLEITDCPKLESLPDNIDHLTALESLRIKGCPDLCKKYQPHVGEFWLKISHIKNIVID 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00166 860 Gene3D Ribonuclease Inhibitor 562 856 IPR032675 -
Lapu1g00166 860 Gene3D - 149 333 IPR027417 -
Lapu1g00166 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 437 IPR027417 -
Lapu1g00166 860 Pfam NB-ARC domain 171 425 IPR002182 GO:0043531
Lapu1g00166 860 SUPERFAMILY L domain-like 501 854 - -
Lapu1g00166 860 PRINTS Disease resistance protein signature 195 210 - -
Lapu1g00166 860 PRINTS Disease resistance protein signature 375 389 - -
Lapu1g00166 860 PRINTS Disease resistance protein signature 796 812 - -
Lapu1g00166 860 PRINTS Disease resistance protein signature 278 292 - -
Lapu1g00166 860 Gene3D - 423 511 IPR036388 -
Lapu1g00166 860 PANTHER DISEASE RESISTANCE PROTEIN RP 35 830 IPR044974 GO:0006952
Lapu1g00166 860 FunFam Probable disease resistance protein At1g61300 150 332 - -
Lapu1g00166 860 Gene3D - 338 422 IPR042197 -
Lapu1g00166 860 Gene3D - 10 124 - -
Lapu1g00166 860 Pfam Rx N-terminal domain 11 98 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00166 Lapu-Chr1 7279030 7281611 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00166 200 857 WRKY Transcription Factor Family AT5G45050 21.888 1.32e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00166 - - pvu:PHAVU_001G133600g 1224.92