Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00165 ATGATCATGGCCGAAGTATTTCTCTTCAGCATCGCCGACTCACTCATAGCAAAGCTTGCGTCTCAGCTTTATGAAGAAGCTTCTCGGGTTATGGGTTTGTACCATCGTCTGCAAGAGTTTACACACACTCTCTCATTGGTCAAGGCTGTGTTGTTGGATGCTGAGCAAAGGCAGGAGCAAAACCATGAGCTGCAGGAATGGCTGAGGCAGCTCAAACGTGTCTTCTCCGATGCCCAAGATATGCTGGATGAATTTGAGTGCCAAACACTGCAAAATCAAGTTGTCAAAGTTTATGGTACCACCAAAAACAAGGTAGGTCGCTTCTTCTCAAGCTCTAATCCACTTGTTTTTCGTTACATGATGGCTCAACAAATTAAAGATATCAGTAACAGACTAGATAAGGTTGCAGCTGATAGGCATAAGTTTGGTCTTCAAACAATTGATGTTGACACACGTGTTGTTCATCGGAGAGAGATGACACACTCCCATGTGAGTGATTCAGATGTGATTGGGAGGGATCATGACAAAGGAAAGATCATACATCTTCTGATGCAGAAGAATCCCATTGATACTGATAAAAGTCTCTCTGTTATCCCCATTGTGGGGATGGGAGGTTTGGGAAAGACCACCCATGCAAAGTTTGTGTTCAATGATGACAGGATAAACAAGTGCTTCCCATTAAAGATGTGGGTATGTGCTTCTGAAGACTTTGACATTAAGCAAGTGATAGTTAAAATTATCAATTGTGCTAATAATTCAGCTTCACTCGCTAATGCTCCTGATTGCCAACAGAATTTGAACATACTAGACATGGAGCAACTGCAAAATCAATTGAGAAACAAACTTGCTGGTAAAAAATCCTTACTCGTCTTGGACGACGTATGGAATGAAGACCGTGTTAAATGGGTTGAGTTAAGAAATTTAATACAAGTAGGTGCTGCTGCAGAAAGTAAAATTCTAGTGACTACACGTAGTCGCTCCATTGCATCCTTGATGGGCACGGTTTCCTCTCACATTTTACAAGGTCTTTCTTTGGAGGATTCAGAGTCTCTGTTTGTCAAATGGGCATTTAAAGAAGGAGAAGAGGAAAATTATCCTCATTTGATAAATATTGGCAGAGATATTGTGAAAAAATGCAGAGGGGTTCCGTTGGCAGTGAGAACATTAGGGAGTTTACTATTTTCCAAATTCGAAGCAAATGAGTGGGAATATGTAAGAGACAGTGAAATTTGGAATTTGCCACAGAAAAAAGAGGATATTTTACCTGCACTCAAATTAAGTTATGATCTTATGCCATCCTATTTGAGGCAATGCTTTGCTTTGTTTTCCCTTTACCCAAAGGATTACGAATTCGTTAATTTTGAAGTAACTACACTTTGGGGTGCACTCGGACTCCTTGGGTCTCCAAAAAGGAATATGACACACGAAGATGTTGCCAATCAGTATTTCTATGAACTACTTTCAAGATCTTTTATTCAAGATTTTGTCAATTGTGGGACAGCTTATACATTTAAAATACATGATTTGGTGCACGATCTAGCCCTGTTTGTCGCAAAAGATGAGTGTCTACTTGTAAATTCCCACACTCGAAGTATACCTGAGAATATTCGTCATCTGTCTTTTGTTGAAAACGATTTGGATGGCAAATCATTCACTGCAAAATCAGTAGGTGTGAGAACCATTCTATTTCCTAAGGTTGGTGTGGGAGCCAAGGGTGAAGCTTTCTTTAGATTGGTTTCAAGGTTCAAATACTTGCATATTTTGGATTTAAGTTATTCTATAGTAGAAACTTTGCCTGATTTGATTGGGAAGTTAAAACATTTAAGATCTCTCAGTCTTTTTAATAATAAGAAAATTAGGAGACTCCCTGATTCCATTTGTGAGCTTCAAAGTTTACAAGTGTTGGACCTTGGTGGATGCCAGGAGCTGGAAGCATTACCAAAAGGATTAAGAAAATTGATTAGTCTCCGAGATTTTGTCATAACCACAAAGCAAGCTGTTCTGCCCGAGAATGACATTGCAAACTTGAGCTCTCTTCAATATTTGACTATTGAATGTTGTGATAATGTGGAGTCTTTATTCTTGGGGATAAAACTTCCTGACGTGAAAGCATTGTGTGTTAGTAGTTGTAAAAGACTAGAGTCTTTGCCACTTGACAGTAAGCATTTTCCTGCATTAGAGATCTTGTGTATTAGGATTTGTGACAAACTGGAATTGTCCAAGGGTCATGAAGACCAGAACTTCAACTTAAAGTTAAAAACAATACTATTTACTTCACTGCCACAGCTAGGGACATTGCCTCTTTGGCTTCAAGGATCTGTTAACACATTACTATCCTTGAGACTAGAACACTGCCACAATCTTGAGGAGCTTCCGGATTGGCTGCCAATGCTAACTTGTCTGAAAGCACTTGACATCACAGATTGCCCAAAGTTGTGTTCTCTTCCAGATGGCATCAATTGCCTCACTGCCCTTGAACGTTTGGAAATCATAGACTGCCCTGAATTATTCAGAAAATTTACGCTGCAAGTTGGAGAGTGTTGGGACCAAATGTCACACATCAAACGGATCAGCATTGTTGAAACGAAAGATCTGGAATAA 2601 0.396 MIMAEVFLFSIADSLIAKLASQLYEEASRVMGLYHRLQEFTHTLSLVKAVLLDAEQRQEQNHELQEWLRQLKRVFSDAQDMLDEFECQTLQNQVVKVYGTTKNKVGRFFSSSNPLVFRYMMAQQIKDISNRLDKVAADRHKFGLQTIDVDTRVVHRREMTHSHVSDSDVIGRDHDKGKIIHLLMQKNPIDTDKSLSVIPIVGMGGLGKTTHAKFVFNDDRINKCFPLKMWVCASEDFDIKQVIVKIINCANNSASLANAPDCQQNLNILDMEQLQNQLRNKLAGKKSLLVLDDVWNEDRVKWVELRNLIQVGAAAESKILVTTRSRSIASLMGTVSSHILQGLSLEDSESLFVKWAFKEGEEENYPHLINIGRDIVKKCRGVPLAVRTLGSLLFSKFEANEWEYVRDSEIWNLPQKKEDILPALKLSYDLMPSYLRQCFALFSLYPKDYEFVNFEVTTLWGALGLLGSPKRNMTHEDVANQYFYELLSRSFIQDFVNCGTAYTFKIHDLVHDLALFVAKDECLLVNSHTRSIPENIRHLSFVENDLDGKSFTAKSVGVRTILFPKVGVGAKGEAFFRLVSRFKYLHILDLSYSIVETLPDLIGKLKHLRSLSLFNNKKIRRLPDSICELQSLQVLDLGGCQELEALPKGLRKLISLRDFVITTKQAVLPENDIANLSSLQYLTIECCDNVESLFLGIKLPDVKALCVSSCKRLESLPLDSKHFPALEILCIRICDKLELSKGHEDQNFNLKLKTILFTSLPQLGTLPLWLQGSVNTLLSLRLEHCHNLEELPDWLPMLTCLKALDITDCPKLCSLPDGINCLTALERLEIIDCPELFRKFTLQVGECWDQMSHIKRISIVETKDLE* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00165 866 Gene3D Ribonuclease Inhibitor 747 855 IPR032675 -
Lapu1g00165 866 Gene3D Ribonuclease Inhibitor 522 699 IPR032675 -
Lapu1g00165 866 SUPERFAMILY L domain-like 505 835 - -
Lapu1g00165 866 Gene3D - 427 515 IPR036388 -
Lapu1g00165 866 Pfam Rx N-terminal domain 14 101 IPR041118 -
Lapu1g00165 866 PRINTS Disease resistance protein signature 379 393 - -
Lapu1g00165 866 PRINTS Disease resistance protein signature 197 212 - -
Lapu1g00165 866 PRINTS Disease resistance protein signature 281 295 - -
Lapu1g00165 866 PRINTS Disease resistance protein signature 627 643 - -
Lapu1g00165 866 Gene3D - 342 426 IPR042197 -
Lapu1g00165 866 Gene3D - 150 339 IPR027417 -
Lapu1g00165 866 Coils Coil 68 88 - -
Lapu1g00165 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 441 IPR027417 -
Lapu1g00165 866 PANTHER DISEASE RESISTANCE PROTEIN RP 64 833 IPR044974 GO:0006952
Lapu1g00165 866 Gene3D - 12 126 - -
Lapu1g00165 866 Pfam NB-ARC domain 174 429 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00165 Lapu-Chr1 7261451 7264380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00165 180 836 WRKY Transcription Factor Family AT5G45050 21.994 9.72e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00165 - - gmx:100805394 1237.25