Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00153 ATGTTTTGTTATGTATGTCTCACTCAGTTCGAACCGGAATCTGAGATTAATCGCTTATCGTGCGGTCATCTCTTCCGCAAAGCTTGCTTGGAGAAGTGGCTGGACTACTGGAACATTACATGCCCACTTTGCAGGACTCCCTTGATGCCTGAAGATGACACACCTTGCTTTCAGACCTTTGCACCTGGTCGATGCACTAAATTGCAAGATTCAAGTTGTCTGGGTGGTGATTCAGGAAGAGAACCTTATATAGTTACACATAATCAACTACTTGCTCATGCAGCTGCTGTAGATGTGTACAAAAAAAAGTTCTAG 315 0.4349 MFCYVCLTQFEPESEINRLSCGHLFRKACLEKWLDYWNITCPLCRTPLMPEDDTPCFQTFAPGRCTKLQDSSCLGGDSGREPYIVTHNQLLAHAAAVDVYKKKF* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00153 104 PANTHER - 3 53 IPR044249 -
Lapu1g00153 104 SUPERFAMILY (Trans)glycosidases 56 103 IPR017853 -
Lapu1g00153 104 Gene3D Glycosidases 51 104 - -
Lapu1g00153 104 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 50 IPR013083 -
Lapu1g00153 104 Pfam Ring finger domain 3 45 IPR001841 -
Lapu1g00153 104 ProSiteProfiles Zinc finger RING-type profile. 3 45 IPR001841 -
Lapu1g00153 104 SUPERFAMILY RING/U-box 2 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00153 Lapu-Chr1 7031318 7032462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00153 3 52 C3H Transcription Factor Family AT2G04240 73.077 1.49e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00153 K16285 - gmx:100786803 125.946