Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00137 ATGGCGCAGAAGAAGAAGGCTAGGGTTTCTGATGACGAGGAAATGAAAGGGCAACATGAAACCAGTCTCTATGAGGTTCTTGGTGTGGAGAGAACCGCCTCTCATCAGGAAATAAAGAAGGCTTACTACAAGTTAGCGTTGAGGCTTCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGAGAAATTCCAGCAACTGCAGAAGGTGATATCAATTCTCGGGGATGAAGAGAAGCGGACCCTCTATGATCACACTGGATGTGTTGATGATGATGACCTTGCTGGAGATGTTGTTCAGGATCTTCAAGAATTCTTCAGAACAATGTACAAGAAGGTAACAGAAGCTGATATCGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTAATTGATTTGTATAAGAAGTGCAAGGGTAGCATGAATAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTACACTTGATTCACATCGATTCAAGGATATTCTCGATGAGGCTATAGCTGCTGGAGAACTAAAGGCAACAAAAGCCTACCAGAAATGGGCTAAGAAAGTATCTGAAACCCAACCGCCCCCAAATCCTCTGAGAAGGAGGGAAAAGTCTAATAAGCAGTCAGAAACAGATCTATATGCAATGATAGCGCAACGTCGAAATGCGAGGAAAGGCCAGTTTGATTCAATGTTCTCATCCCTAGTTTCAAAATATGGTGGAGGTGATATGCCGGAACCCTCTGAAGAGGAGTTTGAAGCTACACGGAGAAAGCTAGAGACGGGTAGATCCTCTAAAAACTCAAAACAATCCAAGCGGAAATAA 831 0.4272 MAQKKKARVSDDEEMKGQHETSLYEVLGVERTASHQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRTLYDHTGCVDDDDLAGDVVQDLQEFFRTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGSMNRLFCSMLCSDPTLDSHRFKDILDEAIAAGELKATKAYQKWAKKVSETQPPPNPLRRREKSNKQSETDLYAMIAQRRNARKGQFDSMFSSLVSKYGGGDMPEPSEEEFEATRRKLETGRSSKNSKQSKRK* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00137 276 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 13 272 IPR042977 -
Lapu1g00137 276 SUPERFAMILY Chaperone J-domain 20 103 IPR036869 -
Lapu1g00137 276 Gene3D DnaJ domain 6 98 IPR036869 -
Lapu1g00137 276 SMART dnaj_3 21 79 IPR001623 -
Lapu1g00137 276 MobiDBLite consensus disorder prediction 251 269 - -
Lapu1g00137 276 MobiDBLite consensus disorder prediction 189 212 - -
Lapu1g00137 276 Pfam DnaJ domain 23 84 IPR001623 -
Lapu1g00137 276 CDD DnaJ 24 76 IPR001623 -
Lapu1g00137 276 MobiDBLite consensus disorder prediction 238 276 - -
Lapu1g00137 276 PRINTS DnaJ domain signature 42 57 IPR001623 -
Lapu1g00137 276 PRINTS DnaJ domain signature 79 98 IPR001623 -
Lapu1g00137 276 PRINTS DnaJ domain signature 24 42 IPR001623 -
Lapu1g00137 276 PRINTS DnaJ domain signature 59 79 IPR001623 -
Lapu1g00137 276 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00137 Lapu-Chr1 6500973 6503971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00137 24 84 C2H2 Transcription Factor Family AT1G74250 39.394 9.92e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00137 K09529 - gmx:100793909 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00137 1 6500973 6503971 Lapu1g00137 1 6500973 6503971 ECH
Lapu1g00137 1 6500973 6503971 Lapu7g00230 7 2588394 2591959 PCT