Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00135 ATGGAAGAATCACACTCTATGCTTCAGGATGCAACAAATATGGAACCAACCATGTTAACCACTCAAGAAGGCACAGCCAGGAATTGGAATCAACCCCATCAACACCTTGTGACTCCACAAACGGAAAGCACTTCTCAAGGGTCAATGAACAATTCGACCTGCAGTTCATCCCTCCAATATGATGTGTTATCCCTATTAGAGGGAATAATTAACGAAAAACACATAGAAGAAACCCTAATCCAATCCAAGCTATTGTCCTGCAATGTTGGCTCCATTGCAGCTACAGCAACAGCAACCAGGATTGTTAATGAGAGGGAACGAAATGATGGAGAGAATGATCGAAGACAGCATGAAGCGTGTCTTGATTTGGTTGCAAAAACAATTGGTAGCAAGAGCTCTGTGTATCGAGGAGTAATCAAGTGCAACGATGATCGTTTCGAAGCATTTGTGTGGGATAGCAGCGACCCAGGAGAAAGAGGAAGAACAGGTGCTTATTCAACTGAAGTTGACGCCGCCAAAGCTCATGATTTAGTGTCAATCAGAATAGGGGGCTTAAAAGCATTAACGAATTTTCATATGAGATGTTATTCCAAGGACATGGATGAAATGCGGAGAATGAGTAAATGGGACTATATTTGTGCTGTCAGAGGGTTGGGCAAGGGCTATACAGACGGTGACTCCCCTTTCCGTGGCGTCTACAGTGCAGAGGATGCAGCGAGAGCTTATGACATCATATCAATAAAACTGAAGGGAGGGGATGCAATTACTAACTTTGATTGGAATTCCTATGAAACTGAGGGCATAATGGAGAGTGTGATTACTCAAGCAGTGGATGGATCCATTATTCTGCAGAAAGAAGAAAGCAATAAAGAAACCGAAGCATCTCCTCAAAACAGCTCCTTAGTCCAAAGCCATCCTCAACCACCGAGCAACCCCTCTTTTTGTCGTTGCTGCCACGACCAAATTTTCACACCGAGCAACCCTCATGGTCTTGGTGGAATTGCTGATAGTGCTGGAAATAGTGCAAGTGACAATTCGATTGGTAACGATGCTGTACAGTTTCGAAACGAGAATGCAACACAGCAAGAGCCACTTCAGACTCAGAGGCAAGTGAGTTTCAACGATGGCTTTGATCAGAACCTTGTCATCGACAACAACAACAACAACAACAATCAGCTTCCAAATGCAACACAGCAACAGCCACTTCAGACTCCGAGGCAAGTGAGTTTTAGCAATGGCTTTAATGAGAACCCTGCCAACAACGACCAGTTTCTGCCTCAGAGTTCTAACCTTGCTTTGCCTGTTCCTGGCATCCGAAATCTAGAGCTAGAAAAGTGTGTCCGTTTCCCTGATTGGCGATCAGGTTTTGGAAAGAAGCTACTCGGGGGGAACTTGGAATTGGAACCCTTAACCAATATTTCTGCCCTGAGTGTGCAACCTCTACCGCAAGTCACGCTGAATGGAAGTACCGGAGCAACACAGCTTCACTCACCTGCATTGCACCAAAGTTATGAGCATCAGAACTTGAACTCCTGCTCCTCTGATTGTTCTCAGAATCCTATTTCTGAACCAAACAGCAACAGCTTCCAAAGTCAAATTGATATGAACCTGAGAGATTATCTCAACAGATCTTACATAGAAGACACTGATTTCACATGTGATTATGACATGTTTTCAGCAATGAATGGGGGTAGATAA 1698 0.4411 MEESHSMLQDATNMEPTMLTTQEGTARNWNQPHQHLVTPQTESTSQGSMNNSTCSSSLQYDVLSLLEGIINEKHIEETLIQSKLLSCNVGSIAATATATRIVNERERNDGENDRRQHEACLDLVAKTIGSKSSVYRGVIKCNDDRFEAFVWDSSDPGERGRTGAYSTEVDAAKAHDLVSIRIGGLKALTNFHMRCYSKDMDEMRRMSKWDYICAVRGLGKGYTDGDSPFRGVYSAEDAARAYDIISIKLKGGDAITNFDWNSYETEGIMESVITQAVDGSIILQKEESNKETEASPQNSSLVQSHPQPPSNPSFCRCCHDQIFTPSNPHGLGGIADSAGNSASDNSIGNDAVQFRNENATQQEPLQTQRQVSFNDGFDQNLVIDNNNNNNNQLPNATQQQPLQTPRQVSFSNGFNENPANNDQFLPQSSNLALPVPGIRNLELEKCVRFPDWRSGFGKKLLGGNLELEPLTNISALSVQPLPQVTLNGSTGATQLHSPALHQSYEHQNLNSCSSDCSQNPISEPNSNSFQSQIDMNLRDYLNRSYIEDTDFTCDYDMFSAMNGGR* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00135 565 MobiDBLite consensus disorder prediction 329 348 - -
Lapu1g00135 565 MobiDBLite consensus disorder prediction 378 427 - -
Lapu1g00135 565 MobiDBLite consensus disorder prediction 293 311 - -
Lapu1g00135 565 ProSiteProfiles AP2/ERF domain profile. 134 192 IPR001471 GO:0003700|GO:0006355
Lapu1g00135 565 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 83 355 - -
Lapu1g00135 565 MobiDBLite consensus disorder prediction 287 313 - -
Lapu1g00135 565 Gene3D AP2/ERF domain 134 194 IPR036955 GO:0003700|GO:0006355
Lapu1g00135 565 Gene3D AP2/ERF domain 223 260 IPR036955 GO:0003700|GO:0006355
Lapu1g00135 565 SMART rav1_2 134 198 IPR001471 GO:0003700|GO:0006355
Lapu1g00135 565 SUPERFAMILY DNA-binding domain 133 193 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00135 Lapu-Chr1 6438761 6442177 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00135 118 271 AP2-EREBP Transcription Factor Family AT1G51190 31.217 1.50e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00135 - K09285 pvu:PHAVU_001G137500g 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00135 1 6438761 6442177 Lapu1g00135 1 6438761 6442177 ECH