Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00117 ATGGATGCTGCCAGTGCTACCCTTTTGTGTTATATCTTCTCCTCCTCCTTAGCCTTCCTTCTTTTGACTCTACTTTTCAAGTTCTTTGGCATTTTAGGAACCAAAAATGGAAGTGCTCGACCTCCACCATGTCCACCATCACTTCCCATCATCGGCCATCTCCACCTTGTGGGTTCCGTCGTACCAAAATCATTCCAAGCTCTGGCTAGCCAATATGGCCCTCTCATTCAGCTCCGTTTAGGTGCCTCAACATGTCTAGTTGTCTCCAACGCTCAAGTTGCCAAAGAAGTGATGAAAATACATGACCTCAATTTCTCTTACAGACCCCAGTTTGGATCCTCAGACAACTTCTTATACAAAGGCTCTGCTTTCATCACTGTCCCTTATGGCCCTTATTGGCGCTTCATAAAAAAGATTTGTGTTACTCAACTTCTCTCCAGCACGCAGCTTGGGCGCTTCCTGCACATCCGACAGCAGGAGATAGAGAAGCTCTTGAAATCTCTTGTGGAGTGTTCTTCTGAGGACATGGACACGGATTTGAGCCGTGAGCTCACTGCTTTGACCAACAATATCCTGTGTCGAATGGCCATGAGCACGAGTTGTTTAGACAACTTTAATGATGCTGAGGATATTCTTGGCCTGGTGAGGGAGTTTATGCACATGGGAGCTAAGTTGAGCATGGGTGAGGTGTTGGGACCTTTGGGAAAGTTTGACTTGTTTGGGTATGGGAAGAAGCTTGTTAGAATAGTTGGCAAATTCGACCGGGTTTTGGAGCGCATCTTAGAGGAACATGAAGTGAAAAATTCGGAATCAGAGGACATGATGGATATTCTATTGCGAGTCCACAAAGATCCAAATGCTGAAATGAGGTTAACAAGGAAGGATATCAAGGCCTTCTTCCTAGATATTTTCCTAGCGGGCACAGACACGTCTTCAACAGCGTCACAATGGGCCATGGCAGAAATCATGAACAAGTACATTCCATTTGGGTATGGGAGAAGGGGATGCCCTGGATCTTCCCTTGCCTTAACGGTGATACAACTGACAGTAGCATCACTGATCCAATGTTTTGAATGGAAGATGAAAGATGGAGAGAGGGTTAGTATGGAAGAAGGGTCATCATTTTCTACAGGATTGGCAAACCCACTTGTTTGTTACCCTGTCACTCGTTTTAATCCTTTTTAA 1185 0.4515 MDAASATLLCYIFSSSLAFLLLTLLFKFFGILGTKNGSARPPPCPPSLPIIGHLHLVGSVVPKSFQALASQYGPLIQLRLGASTCLVVSNAQVAKEVMKIHDLNFSYRPQFGSSDNFLYKGSAFITVPYGPYWRFIKKICVTQLLSSTQLGRFLHIRQQEIEKLLKSLVECSSEDMDTDLSRELTALTNNILCRMAMSTSCLDNFNDAEDILGLVREFMHMGAKLSMGEVLGPLGKFDLFGYGKKLVRIVGKFDRVLERILEEHEVKNSESEDMMDILLRVHKDPNAEMRLTRKDIKAFFLDIFLAGTDTSSTASQWAMAEIMNKYIPFGYGRRGCPGSSLALTVIQLTVASLIQCFEWKMKDGERVSMEEGSSFSTGLANPLVCYPVTRFNPF* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00117 394 Gene3D Cytochrome P450 324 381 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00117 394 SUPERFAMILY Cytochrome P450 40 390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00117 394 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 329 338 IPR017972 GO:0005506|GO:0016705
Lapu1g00117 394 PRINTS E-class P450 group I signature 326 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00117 394 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00117 394 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00117 394 PRINTS E-class P450 group I signature 336 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00117 394 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 325 376 - -
Lapu1g00117 394 Gene3D Cytochrome P450 33 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00117 394 Pfam Cytochrome P450 42 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00117 394 Pfam Cytochrome P450 325 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00117 Lapu-Chr1 6126653 6128376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00117 295 394 Cytochrome P450 AT2G42250 44.000 3.13e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00117 - - pvu:PHAVU_001G139200g 526.168