Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00115 ATGGCTGATTACCAAGACTACATCCTACTTTTCATCGCATGGTTAGTCTCCACAATCGTGGTTCGAGCCATACTCAGCAGAAAACAAAACAAGACTAATAGGCCACCAAGTCCACTAGCCTTACCCATCATTGGACATCTCCACCTTCTTGCTCCAATACCTCACCAGGCTCTTCACAAGCTCTGTACTCGCTATGGACCCATAATGCACCTTTTCCTTGGTTCTGTGCCTTGTGTCATAGCTTCCACACCAGAAGCTGCTAGAGAATTCCTCAAAACTCACGAAACCCATTTCTCCAACCGACCGCAAAGTTCTGCAGTTGATTTTCTAACTTATGGCTCCCAGGACTTCTCTTTTGCGCCATATGGACCTTATTGGAAATTCATGAAGAAAATATGCATGTCTGAACTTCTGGGGGGTCCCACGTTAAGTCAGCTAGTTCCTGTGAGGAGACAAGAGACGTTAAGGTTTCTGAGGCTCGTGCTCAAGAAAGGGAATGCGGGTGAGGCTATTGATGTTGGGGGAGAACTTTTGAGACTCTCGAATAACGTTATATCGAGGATGATTATGAGCCAAACATGTTCTGAAGATGACAGTGAAGCCGAAGAGGTGAGGAAGTTGGTGCAAGACACTGTTCTTCTCACGGGGAAGTTTAATGTGTCGGATTTTGTTTGGTTCTTTAAGAACTGGGATGTGCAGGGGTTCGGGAAAAGACTCAAGGAAATTCGGTACAGGTTTGACACCATGATGGAGAGGGTGATCGAGGAGCATCAAGAGGAAAGGGTGAAGAGAAAAGAAGTGGGAGGAGAGGGTCAAATCAAGGATCTACTTGATGTATTATTGGACATACATGAAGATGAGAACTCTGAAATAAAATTGACAAAAGAGAACATAAAGGCCTTCATCATGGACGTATTTATGGCAGGAACAGACACTGCAGCCTTGACAATTGTATGGGCTCTGGCTGAGTTGATTAACCACCCACATGTGATGGAGAGAGTAAGACAAGAGATTGATGCCGTGACTGGAAGTGGTAGAATAGTAGAAGAATCAGACCTTGTCAACCTTTCTTATCTACAAGCTGTAGTCAAAGAAACGCTAAGGATTCACCCCACTGGTCCATTAATTGTGAGAGAATCGTCTGAAAGCTGCACAATCTGGGGCTATGAGATTCCACCAAAGACTCAGTTGTTTGTTAATGTGTGGGCTATTGGTAGGGATCCCAACCACTGGGAGAACCCACTTGAGTTTAGACCAGAGAGGTTTCTTAGTGAAGAGGGAAGTGGTAAGAACCAGTTAGATGTGAGGGGACAATATTTTCACCTGATTCCATTTGGGAGTGGAAGAAGAGGATGTCCTGGAACCTCACTGGCTTTGCAGGTTGTACAGACCAACCTTGCTGCTATGATTCAGTGCTTTGAATGGAAGGTTAAAGGAGGCAGTGAGACTGTTGACATGGAAGAGAAACCTGGGTTAACTCTTTCGAGGGCTCATCCATTGGTTTGTGTTCCAGTGCCTAGGCTTAATCCTTTTCCTCCCCTCTGA 1545 0.4518 MADYQDYILLFIAWLVSTIVVRAILSRKQNKTNRPPSPLALPIIGHLHLLAPIPHQALHKLCTRYGPIMHLFLGSVPCVIASTPEAAREFLKTHETHFSNRPQSSAVDFLTYGSQDFSFAPYGPYWKFMKKICMSELLGGPTLSQLVPVRRQETLRFLRLVLKKGNAGEAIDVGGELLRLSNNVISRMIMSQTCSEDDSEAEEVRKLVQDTVLLTGKFNVSDFVWFFKNWDVQGFGKRLKEIRYRFDTMMERVIEEHQEERVKRKEVGGEGQIKDLLDVLLDIHEDENSEIKLTKENIKAFIMDVFMAGTDTAALTIVWALAELINHPHVMERVRQEIDAVTGSGRIVEESDLVNLSYLQAVVKETLRIHPTGPLIVRESSESCTIWGYEIPPKTQLFVNVWAIGRDPNHWENPLEFRPERFLSEEGSGKNQLDVRGQYFHLIPFGSGRRGCPGTSLALQVVQTNLAAMIQCFEWKVKGGSETVDMEEKPGLTLSRAHPLVCVPVPRLNPFPPL* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00115 514 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 Pfam Cytochrome P450 35 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 Gene3D Cytochrome P450 19 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 SUPERFAMILY Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu1g00115 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 501 - -
Lapu1g00115 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Lapu1g00115 514 FunFam Cytochrome P450 family protein 26 502 - -
Lapu1g00115 514 CDD CYP93 66 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00115 Lapu-Chr1 6084199 6128376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00115 1 507 Cytochrome P450 AT5G06900 52.259 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00115 K24188 - gmx:100779342 915.99