Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00110 ATGGCTTCGAAGACCACCAACCCAACAACAACTAATCAATTGGAACCAGTTCCCCCACCTCAGCACCGTTACCCTCATCCTCATCCTCATCATTATCAGTTACAACAACACCAACACCAACACCAACATCATCAAATTCATGACCATCAAATTTCTTTTGGAATGATGCAATCGTCTTCTTCGTCTTCCTCTATCCCCGGAAACTATCTCAGAGGCAAGGATTCCGGAACTTATGACTTGGGTGAATTGGATCAAGCCTTTTTCCTCTACCTTGATGGACAAGCAGACCCCTCCACTGTTCAGGACCAAAGACAGAATTCATCATCAGGAATGAGGCCTCCGACTCTCAACATTTTCCCATCTAAGCCTATGCACCGAGAGAGTAATCGCAAAGGTCCAACGTCAAGTTCGGAACAAGAAGGACCGAAAACACCAGATCCCAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAACAACTAGAGTCAAGTAGGGTTAGGCTTAATCAGCTGGAACAAGAGCTACAACGTGCTAGAACTCAGGGCATGTTCTTAGGTGGAGGTGCACTTTTGGGAGGAGAGCAAAGCCTCCCTGTCGCTATGAATACCATTAGCTCGGAGGCTGCAATGTTTGACGTGGAATATGCAAGATGGGTTGAGGAGCACCACCGCATAGTGTGTGAGCTGAGAGCTGCAGTGCAAGAGCACCTTCCTGAGAACGAGCTTAGACTTTTTGTGGACAATTGCTTGGCGCATTATGACCAAGTAATGAACCTCAAAAGCCTAGTGGCCAAAACAGACGTGTTCCATCTGGTTTCTGGTATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGAGGATTCAGGCCTTCTGAACTCATTAAGATTATTCTGAGTCAAATTGAGCCTCTGACGGAGCAACAAATATTGGGTATATGTGGATTGCAACAATCGACTCAAGAGGCAGAAGAGGCTCTCTCTCAAGGGCTGGAGGCTCTCAATCAATCTCTTTCGGACACAATAGCTGCAGACTCTCTAAGCTATCCTCCCAATATGGCTAACTATATGGGACAAATGGCTGTGGCCATGAACAAGCTCTCAACTCTCGAAGGTTTCGTTAGACAGGCAGATAATCTTCGGCACCAAACCATTCACCGTCTGCATCAGGTTCTAACAACGCGTCAAGCAGCAAGGTGTTTTCTGGCCATAGCCGAGTACTTCCATCGTCTTCGAGCTCTGAGTTCATTGTGGTTGGCACGCCCTCGCGTAGAATAG 1320 0.472 MASKTTNPTTTNQLEPVPPPQHRYPHPHPHHYQLQQHQHQHQHHQIHDHQISFGMMQSSSSSSSIPGNYLRGKDSGTYDLGELDQAFFLYLDGQADPSTVQDQRQNSSSGMRPPTLNIFPSKPMHRESNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRVRLNQLEQELQRARTQGMFLGGGALLGGEQSLPVAMNTISSEAAMFDVEYARWVEEHHRIVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSLVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLSDTIAADSLSYPPNMANYMGQMAVAMNKLSTLEGFVRQADNLRHQTIHRLHQVLTTRQAARCFLAIAEYFHRLRALSSLWLARPRVE* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00110 439 ProSiteProfiles DOG1 domain profile. 221 435 IPR025422 GO:0006351|GO:0043565
Lapu1g00110 439 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 146 190 IPR004827 GO:0003700|GO:0006355
Lapu1g00110 439 MobiDBLite consensus disorder prediction 97 115 - -
Lapu1g00110 439 MobiDBLite consensus disorder prediction 24 44 - -
Lapu1g00110 439 Coils Coil 167 194 - -
Lapu1g00110 439 Pfam Seed dormancy control 239 313 IPR025422 GO:0006351|GO:0043565
Lapu1g00110 439 SMART brlzneu 144 217 IPR004827 GO:0003700|GO:0006355
Lapu1g00110 439 CDD bZIP_HBP1b-like 148 197 - -
Lapu1g00110 439 MobiDBLite consensus disorder prediction 1 48 - -
Lapu1g00110 439 SUPERFAMILY Leucine zipper domain 148 190 IPR046347 GO:0003700|GO:0006355
Lapu1g00110 439 PANTHER TRANSCRIPTION FACTOR TGA9 105 437 - -
Lapu1g00110 439 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 151 166 IPR004827 GO:0003700|GO:0006355
Lapu1g00110 439 Gene3D - 147 197 - -
Lapu1g00110 439 Pfam bZIP transcription factor 148 183 IPR004827 GO:0003700|GO:0006355
Lapu1g00110 439 MobiDBLite consensus disorder prediction 97 151 - -
Lapu1g00110 439 FunFam BZIP family transcription factor 147 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00110 Lapu-Chr1 5995661 6001813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00110 67 437 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 60.091 1.71e-178 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu1g00110 DOG1 7.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00110 K14431 - gmx:100815176 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00110 1 5995661 6001813 Lapu7g00214 7 2406236 2414039 PCT