Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00103 ATGATTCGCCACTTGCTCTATGTGCATCTTAATCTCTTTGTATTTTCAATTTTGGTTTGTCAGAGCTTGGCGTTCACGCACTCACACGAAGTATCAGCCCTCCAGGATCTATATAGGACCTTTAACTACCCACCGATACTCAAAGGATGGAATGGTAGCGATCCTTGTGGAGAGTCTTGGACAGGAGTTGCTTGTTCTGGGCCATCAGTTATACAGCTAAAACTTCAAGGATTAAACCTCACTGGGTACATTGGAAGCATGCTATATAATCTACCTAACTTGAAGCAACTGGATGTCAGTTCAAATAACATAGAGGGCGAAATTCCATTTGGTTTACCCCCCAATGTCACATATATGAATTTAAGCCACAATTTGCTACATGGACCAATTGGAGATGTATTTACTGGTTTAGATAAACTCAAAGAAATGGACCTTTCATACAATAATTTCTCAGGAGACCTACCGTATTCATTTGGTTCCTTAAGAAACCTTGCCAGATTGTTCCTGCAGAATAACAGATTCACTGGATCAGTCGCCTACTTGGCTGAACTTCCACTAACAGATTTGAACATCGGAGATAATCTGTTTAGTGGCATTCTTCCGCAGCATTTTCAATCCATACTGAATTTATGGATTGGAGAGAATAAATTCCATGTGGCCGACAACTCTCCTCCCTGGACTTTTCCTCTGGATACCGTGTCAGTTGAGCAGAACACTAGTAGCCCACCCACGACTCAAGCAAATGCCATAAAGAATTATCCTCCTCCTAGAGTAAGTGAGGTTCCTCCCAGAGTAAATGAAGCTCATACCGGAGTAAATGAGGCTCCTCCCAGAGTAAGTGAGGCTCTTCCCCAAGTACACAAGGCTCCTCTCAGAGTAATTAAGCACAACAAAAACCGTGTAGGCCCAGGAGGAATAGCATTTATGATTGGTGGAGGAACACTGATGGCCACAGGGGTGGCTCTCTTTGTTGCAATCCGTTTGAATAAACTTCGTCTAGAGAGCCCAAACTTGAGCTCAGATAGCAACCATGGCTCATTTCATTCTCATCCGACCAGTGCAACCATAGGGGTATCTTCTACCGCACTCGAGGAGAGCCCACGGATTCCTCCCTTTAATTCTGCATCCTTTTCGGGTCCTGTGAGATTACTTTCCATGAACTATAACAACACAGAGGAACCAGTAAGAAAAAGTTTTTCTAAAAGAGGCAGATCCACTGGAAGAACGAAAATTTACACAGTAGCAGAGCTTGAGTTAGCTACTAATTGCTTCAGTGAAGCCAACATTCTGGGAGAAGGATCTCTTGGCCCTGTTTATAGAGCTAAATTTCCGGATGACAAAATTTTGGCCGTGAAGAAGATAAACATCGTCGGCCTGTCTTTCAAAGAAGAGGAAAAGCTCTTGGATGTCATTTGCACGGTTTCCCGACTGAAGCACCCCAACATCGTAGCACTCAATGGTTACTGTTTGGATAACGGAAAGGGTCTATTTGTTTACGATTATGTTGGAAATGTCACTCTAAACGACGCCCTTCACAGCGAGGCATGCCAACCTATGTCATGGGTTCACCGTCTCCAGATTGCTCTAGGTGTTGCTAAGGCTCTAGACTATTTGCACTCAGCGTTCTGCCCTCCCGTGGCCCACGGCAATTTGAAGGCTGCCAATGTTCTACTGGATGAAAATTTGATGCCTCGTGTTTGTGACTGTAGCTTGAATATTTTGAGACGACTGAATGTCAATCAAGTTGAAATTCCGGCTAATGAGATTAATATTGAAGAGATGGGCTACGTTGCGCCAGATCATGGCCAACCAGGAAGCAGCAGCAGAAAGAGAGACGTTTTTGCTTTTGGGGTATTGCTTCTGGAACTGTTAACGGGAAGAAAACCTTTCGATAGAGACAGGCTAGTGGAGGAGCAATATCTGGTGAAATGGGCCCCGCCCATGCTTCCTTACAGAGCGAGTTTGGAACAGCTGGTGGATCCCCGCATGAAAAGAACATTTTCATCCAAGGCTCTTTCCCGTTATGCTGATATCATCTCCCTCTGTATACAGCCTGTAAGGCAACTCCGTCCTGCAATGACCGAAGTTATGGAGTCTCTTGAATCTTTATACCGAAAGTTCGACATTGAAAAGAGCGATGTAGCGGATGGTACTGAACTTGATATATTTTAG 2172 0.4424 MIRHLLYVHLNLFVFSILVCQSLAFTHSHEVSALQDLYRTFNYPPILKGWNGSDPCGESWTGVACSGPSVIQLKLQGLNLTGYIGSMLYNLPNLKQLDVSSNNIEGEIPFGLPPNVTYMNLSHNLLHGPIGDVFTGLDKLKEMDLSYNNFSGDLPYSFGSLRNLARLFLQNNRFTGSVAYLAELPLTDLNIGDNLFSGILPQHFQSILNLWIGENKFHVADNSPPWTFPLDTVSVEQNTSSPPTTQANAIKNYPPPRVSEVPPRVNEAHTGVNEAPPRVSEALPQVHKAPLRVIKHNKNRVGPGGIAFMIGGGTLMATGVALFVAIRLNKLRLESPNLSSDSNHGSFHSHPTSATIGVSSTALEESPRIPPFNSASFSGPVRLLSMNYNNTEEPVRKSFSKRGRSTGRTKIYTVAELELATNCFSEANILGEGSLGPVYRAKFPDDKILAVKKINIVGLSFKEEEKLLDVICTVSRLKHPNIVALNGYCLDNGKGLFVYDYVGNVTLNDALHSEACQPMSWVHRLQIALGVAKALDYLHSAFCPPVAHGNLKAANVLLDENLMPRVCDCSLNILRRLNVNQVEIPANEINIEEMGYVAPDHGQPGSSSRKRDVFAFGVLLLELLTGRKPFDRDRLVEEQYLVKWAPPMLPYRASLEQLVDPRMKRTFSSKALSRYADIISLCIQPVRQLRPAMTEVMESLESLYRKFDIEKSDVADGTELDIF* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00103 723 Gene3D Ribonuclease Inhibitor 26 251 IPR032675 -
Lapu1g00103 723 Gene3D Phosphorylase Kinase; domain 1 386 501 - -
Lapu1g00103 723 ProSiteProfiles Protein kinase domain profile. 424 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00103 723 Gene3D Transferase(Phosphotransferase) domain 1 503 720 - -
Lapu1g00103 723 MobiDBLite consensus disorder prediction 235 255 - -
Lapu1g00103 723 Pfam Leucine rich repeat 114 174 IPR001611 GO:0005515
Lapu1g00103 723 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 703 IPR046959 -
Lapu1g00103 723 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 118 - -
Lapu1g00103 723 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Lapu1g00103 723 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 389 501 - -
Lapu1g00103 723 Pfam Protein kinase domain 425 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00103 723 MobiDBLite consensus disorder prediction 235 252 - -
Lapu1g00103 723 Coils Coil 723 723 - -
Lapu1g00103 723 SUPERFAMILY L domain-like 27 212 - -
Lapu1g00103 723 FunFam Leucine-rich repeat receptor-like protein kinase 502 711 - -
Lapu1g00103 723 SUPERFAMILY Protein kinase-like (PK-like) 405 701 IPR011009 -
Lapu1g00103 723 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 119 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00103 Lapu-Chr1 5833635 5839135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00103 12 719 Strubbelig Receptor Gene Family AT5G06820 47.619 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lapu1g00103 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00103 - - gmx:100775254 1141.33