Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00094 ATGTCTGTGAGAACTAGTGCCAATGGTGGAATAACTCCTTCAGATTTTGTTACCCACATTCTTAAAAAGTTCGGGGGACAAGTTGGACCAAGTAATAGCACAGAAGATTGCAGGAGAAACTCAGTAGCTTGGAATGATATTGGAGTAGCAGTTTCAAATGTTTTTAGAGCGGGTTATGGATGTTGTACAATGATGGGCGCAATGGATGCTAAAATAAAGCAGAGGAAGATCATTAATCGTCGAAAGAGTGTGAGACCCACTGAATTGGCACGGCCTAAAGAGCTATGTGGAGGTTCAGGGGAGGAGATAACTGAGACTGATAAGCATATGTTAACTATGTTTAACATCTTAAGGATTAATAAAGTTGTCAAGCTTGAAAATCTGGTTTTGAATCGGAACTCATTTGGACAAACCGTGGAGAACTTATTTGCTTTATCCTTTTTAGTCCGAGATGGTCGGGCTGAAATAAAAGTCAATGAGGCTGGATGGCAACTAGTTTCGCCAAGGAATGCTCCTGCTGCAAATTCAGTTCATTCTGGGGATGTTTCTTTCAGCCACTTTGTATTCCGATTTGACTTCAATGATTGGAAGGTATTTTATTAG 603 0.403 MSVRTSANGGITPSDFVTHILKKFGGQVGPSNSTEDCRRNSVAWNDIGVAVSNVFRAGYGCCTMMGAMDAKIKQRKIINRRKSVRPTELARPKELCGGSGEEITETDKHMLTMFNILRINKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANSVHSGDVSFSHFVFRFDFNDWKVFY* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00094 200 PANTHER UNCHARACTERIZED 5 197 IPR027786 GO:0005634|GO:0006281|GO:0030915
Lapu1g00094 200 Pfam Nse4 C-terminal 123 197 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00094 Lapu-Chr1 5634044 5635461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00094 2 199 Non-SMC Element family AT1G51130 49.749 3.28e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00094 K22825 - gmx:100781485 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00094 1 5634044 5635461 Lapu1g00094 1 5634044 5635461 ECH