Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00083 ATGGCTGGCAGTAACCAAGTCAATCTCAATGAATCTAGGAGTGTTGTTCCGCTAAATACATGGGTGTTAATCTCCAATTTCAAGCTGTCTTATAAGCTTCTTAGACGTGACGATGGAACCTTCAATCGTCAGTTGGCGGAGTTTCTCGATAGGAAGGTCCCCGCCAATGCAATTCCTGTTGATGGGGTGTTTTCAATCGATCATGTGGATAGAAGCGTTGGTTTGTTTTACCGGGTGTATTTGCCAGCCTCTGGGGAAGAAGCTCCATGGGGTATCAGAGACCTTGAGAGGCCGTTGAGCACCACGGAAATTGTTCCTGTTATCATATTCTTTCACGGGGGAAGTTTCTCGCATTCTTCAGCAAACAGTGCTATCTACGATACCTTCTGCCGGCGCCTTGTGAGCATTTGCAAGGCTGTTGTGGTGTCTGTGAACTACCGGAGATCGCCGGAGCATCGGTACCCTTGCGCCTACGATGATGGCTGGGCAGGATTAGAGTGGGTGAAGTCAAGAAAATGGCTGCAAAGTGGGAGGGAGTCTAAGGTTCATGTCTACTTGGCAGGGGACAGTTCTGGTGGGAACATTGTTCATCATGTGGCAGTAAGGGCTGCGGAGGAAGAAATTGAGGTCCTGGGGAATATTCTTCTTCACCCTTTGTTTGGTGGAGAGAAGAGGACGGAATCAGAATTGAGATTGGATGGGAAATACTTTGTGAGGTTGAAGGATCGTGATTGGTATTGGAGGGCTTTTCTGCCAGAAGGAGAGAGTAGAGACCATCCTGCTTGCAACCCATTTGGACCAAGGGGGAGAAGCCTTGCGGGACTCAATTTCCCCAAAAGTCTTGTTTGCGTGGCTGGTTTGGATCTTCTGCAGGATTGGCAATTGGCATATGCAAAAGGTCTTGAGGATTCTGGACAACAGGTCAAACTTCTTTATCTCATGGATGCCACTATTGGCTTCTACTTCTTGCCAAACAATGATCATTTCTACTGCCTCATGAGGGAAATCAACGACTTCGTGAATTCTGACTGTTAA 1035 0.4754 MAGSNQVNLNESRSVVPLNTWVLISNFKLSYKLLRRDDGTFNRQLAEFLDRKVPANAIPVDGVFSIDHVDRSVGLFYRVYLPASGEEAPWGIRDLERPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAVVVSVNYRRSPEHRYPCAYDDGWAGLEWVKSRKWLQSGRESKVHVYLAGDSSGGNIVHHVAVRAAEEEIEVLGNILLHPLFGGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGESRDHPACNPFGPRGRSLAGLNFPKSLVCVAGLDLLQDWQLAYAKGLEDSGQQVKLLYLMDATIGFYFLPNNDHFYCLMREINDFVNSDC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00083 344 FunFam Gibberellin receptor GID1 1 342 - -
Lapu1g00083 344 SUPERFAMILY alpha/beta-Hydrolases 58 341 IPR029058 -
Lapu1g00083 344 PANTHER ARYLACETAMIDE DEACETYLASE 43 311 - -
Lapu1g00083 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Lapu1g00083 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Lapu1g00083 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Lapu1g00083 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00083 Lapu-Chr1 5136127 5141124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00083 1 342 Carbohydrate Esterase AT3G63010 74.636 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00083 K14493 - gmx:100788435 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00083 1 5136127 5141124 Lapu1g00083 1 5136127 5141124 ECH
Lapu1g00083 1 5136127 5141124 Lapu7g00650 7 7512895 7516558 ECH
Lapu1g00083 1 5136127 5141124 Lapu7g00650 7 7512895 7516558 PCT